RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PDIK1LQ8N165 341 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 SLC5A5Q92911 643 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 NID2Q14112 1375 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 GTF2H1P32780 548 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 MSH2P43246 934 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 PGM5Q15124 567 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 FAM102AQ5T9C2 384 aaPredicted RBP11.72□□□□□ -0.53
COL27A1-204ENST00000477421 ARHGEF18Q6ZSZ5 1173 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 APBB1IPQ7Z5R6 666 aaPredicted RBP11.72□□□□□ -0.53
COL27A1-204ENST00000477421 CFAP36Q96G28 342 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 GANQ9H2C0 597 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 PEX10O60683 326 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 TROVE2P10155 538 aaKnown RBP eCLIP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 CHN1P15882 459 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 PDIA2Q13087 525 aaKnown RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 DAB2IPQ5VWQ8 1189 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 ZNF473Q8WTR7 871 aaKnown RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 SEPT1Q8WYJ6 367 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 CFAP57Q96MR6 1250 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 PRMT1Q99873 361 aaKnown RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 LBHD1Q9BQE6 289 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 OSBPL8Q9BZF1 889 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 PPP1R12CQ9BZL4 782 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 PXMP2Q9NR77 195 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 YDJCA8MPS7 323 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 NOL4O94818 638 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 GUCY2CP25092 1073 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 CA8P35219 290 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 MAPK7Q13164 816 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 KCNT1Q5JUK3 1230 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 IRF2BP2Q7Z5L9 587 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 SPATS2Q86XZ4 545 aaKnown RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 SLC13A5Q86YT5 568 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 APOBEC3FQ8IUX4 373 aaKnown RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 ATP8B4Q8TF62 1192 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 ZSWIM1Q9BR11 485 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 PITPNM3Q9BZ71 974 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-204ENST00000477421 UVRAGQ9P2Y5 699 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 NUB1Q9Y5A7 615 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 IGSF9BQ9UPX0 1349 aa11.71□□□□□ -0.53
COL27A1-204ENST00000477421 I3L4J1 428 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 OSBPP22059 807 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 MARCKSL1P49006 195 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 PPATQ06203 517 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 LGSNQ5TDP6 509 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 HGSNATQ68CP4 663 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 CENPUQ71F23 418 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 SEMA4AQ9H3S1 761 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 ANKEF1Q9NU02 776 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 LCMT1Q9UIC8 334 aa11.71□□□□□ -0.54
COL27A1-204ENST00000477421 MED7O43513 233 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 KRT3P12035 628 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 PCK1P35558 622 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CCNA1P78396 465 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 P3H1Q32P28 736 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 TATDN1Q6P1N9 297 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 NT5DC3Q86UY8 548 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 SCYL3Q8IZE3 742 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 C1orf131Q8NDD1 294 aaKnown RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CHMP6Q96FZ7 201 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 RBM15Q96T37 977 aaKnown RBP eCLIP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 KLF6Q99612 283 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 TTYH3Q9C0H2 523 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 MTMR12Q9C0I1 747 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 DCTN4Q9UJW0 460 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 ROBO3Q96MS0 1386 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CAND2O75155 1236 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 STK10O94804 968 aaKnown RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 MT-ND3P03897 115 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 TBXAS1P24557 533 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 TCF7P36402 384 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 ERFP50548 548 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CLCN3P51790 818 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 JAG1P78504 1218 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 TRIM68Q6AZZ1 485 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 GPAT2Q6NUI2 795 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 C1orf228Q6PIY5 440 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 C4orf33Q8N1A6 199 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 ATL2Q8NHH9 583 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 EPS8L3Q8TE67 593 aaKnown RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 PRPF31Q8WWY3 499 aaKnown RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 STMN2Q93045 179 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 EPN3Q9H201 632 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CYP3A7-CYP3A51PA0A087WV96 503 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 PJA2O43164 708 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 ZBED1O96006 694 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 PYGMP11217 842 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CYP3A7P24462 503 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 SNX16P57768 344 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CDR2Q01850 454 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 RCN2Q14257 317 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 CCDC62Q6P9F0 684 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 ENOSF1Q7L5Y1 443 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 NOP9Q86U38 636 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms