RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ERFP50548 548 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 ALDH18A1P54886 795 aaKnown RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 MEI1Q5TIA1 1274 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 CCDC137Q6PK04 289 aaKnown RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 PNMA6AP0CW24 399 aaPredicted RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 ORC2Q13416 577 aaPredicted RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 NBPF20Q3BBV1 942 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 ATP11CQ8NB49 1132 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 AGAP3Q96P47 875 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 KATNAL1Q9BW62 490 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 MUC3BQ9H195 1237 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 GOLPH3LQ9H4A5 285 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 CDHR2Q9BYE9 1310 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 SESN2P58004 480 aaPredicted RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 TAP1Q03518 808 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 COG1Q8WTW3 980 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 OSBPL9Q96SU4 736 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 DDX28Q9NUL7 540 aaKnown RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 TRAF3IP3Q9Y228 551 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 GGPS1O95749 300 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 ARSEP51690 589 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 USP11P51784 963 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 EIF3EP60228 445 aaKnown RBP19.56■□□□□ 0.72
VARS2-209ENST00000477288 CYP26A1O43174 497 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 MED21Q13503 144 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 COG2Q14746 738 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 PLEKHM3Q6ZWE6 761 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 STAG2Q8N3U4 1231 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 ALKQ9UM73 1620 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 DDX5P17844 614 aaKnown RBP19.56■□□□□ 0.72
VARS2-209ENST00000477288 NMT1P30419 496 aaKnown RBP19.56■□□□□ 0.72
VARS2-209ENST00000477288 SPON1Q9HCB6 807 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 ZFYVE28Q9HCC9 887 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 POLRMTO00411 1230 aaKnown RBP19.56■□□□□ 0.72
VARS2-209ENST00000477288 PDAP1Q13442 181 aaKnown RBP19.56■□□□□ 0.72
VARS2-209ENST00000477288 NFIXQ14938 502 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.56■□□□□ 0.72
VARS2-209ENST00000477288 KCNN4O15554 427 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 KCNQ2O43526 872 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 KRT8P05787 483 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 IL31Q6EBC2 164 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 CLMNQ96JQ2 1002 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.56■□□□□ 0.722e-7■■■■□ 20.4
VARS2-209ENST00000477288 ZNF229Q9UJW7 825 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 OVOS2A0A0G2JMS6 1433 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 OVOS2A0A0J9YW53 1432 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 OVOS2Q6IE36 1432 aa19.56■□□□□ 0.72
VARS2-209ENST00000477288 HIST1H2AGP0C0S8 130 aaPredicted RBP19.55■□□□□ 0.72
VARS2-209ENST00000477288 HIST1H2ADP20671 130 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 HIST1H2AHQ96KK5 128 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 HIST1H2AJQ99878 128 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 H2AFJQ9BTM1 129 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 RGL1Q9NZL6 768 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 ARHGAP26Q9UNA1 814 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 MRFAP1Q9Y605 127 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 GMNCA6NCL1 334 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 GOLGA8RI6L899 631 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 SOX11P35716 441 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 MAP3K10Q02779 954 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 CAPZA2P47755 286 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 SNAPC2Q13487 334 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 CYTH1Q15438 398 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 MAPRE2Q15555 327 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 ZNF512Q96ME7 567 aaPredicted RBP19.55■□□□□ 0.72
VARS2-209ENST00000477288 FOPNLQ96NB1 174 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 ADAM33Q9BZ11 813 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 ETNK1Q9HBU6 452 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 KRT87PA6NCN2 255 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 ANGPT2O15123 496 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 PDGFRBP09619 1106 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 ACTR2P61160 394 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 MB21D2Q8IYB1 491 aaPredicted RBP19.55■□□□□ 0.72
VARS2-209ENST00000477288 SH2D3AQ9BRG2 576 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 HDAC6Q9UBN7 1215 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 HACL1Q9UJ83 578 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 SUPT3HO75486 399 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 PARK7Q99497 189 aaKnown RBP19.55■□□□□ 0.72
VARS2-209ENST00000477288 ZNRF3Q9ULT6 936 aa19.55■□□□□ 0.72
VARS2-209ENST00000477288 MYO1GB0I1T2 1018 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 SERPINI2O75830 405 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 FGFR4P22455 802 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 KRT17Q04695 432 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 GLI2P10070 1586 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 UNC13BO14795 1591 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 ACOT2P49753 483 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 MRPL28Q13084 256 aaKnown RBP19.54■□□□□ 0.72
VARS2-209ENST00000477288 TMEM132DQ14C87 1099 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 EYA4O95677 639 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 BAATQ14032 418 aaPredicted RBP19.54■□□□□ 0.72
VARS2-209ENST00000477288 FAM84BQ96KN1 310 aaPredicted RBP19.54■□□□□ 0.72
VARS2-209ENST00000477288 OSBPL1AQ9BXW6 950 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 TUFT1Q9NNX1 390 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 ZFATQ9P243 1243 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 SH3BP1Q9Y3L3 701 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 GH1P01241 217 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 HNRNPH2P55795 449 aaKnown RBP19.54■□□□□ 0.72
VARS2-209ENST00000477288 GRIN1Q05586 938 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 CEP55Q53EZ4 464 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms