RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 S1PR5Q9H228 398 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 UNC45AQ9H3U1 944 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 DDX25Q9UHL0 483 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 DBR1Q9UK59 544 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 PIN4Q9Y237 131 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 REV3LO60673 3130 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 C2orf71A6NGG8 1288 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 KHNYNO15037 678 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 TBX3O15119 743 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 ZNF623O75123 536 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 ZC3H11AO75152 810 aaKnown RBP eCLIP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 MAFO75444 373 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 PSMD10O75832 226 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 ALDH2P05091 517 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 TARSP26639 723 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 PDIA3P30101 505 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 AXLP30530 894 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 QARSP47897 775 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 CCT2P78371 535 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 TFDP1Q14186 410 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 TARBP2Q15633 366 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 CYP26C1Q6V0L0 522 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 OTOP3Q7RTS5 596 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 RAB44Q7Z6P3 723 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 CABP7Q86V35 215 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 ZDHHC14Q8IZN3 488 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 VPS52Q8N1B4 723 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 EPS8L3Q8TE67 593 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 PSPC1Q8WXF1 523 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 CCDC43Q96MW1 224 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 TMEM175Q9BSA9 504 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 MFSD1Q9H3U5 465 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 FAM105AQ9NUU6 356 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 IRAK3Q9Y616 596 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 A0A087WZ62 844 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-214ENST00000477152 BNIP3LO60238 219 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 ZNF862O60290 1169 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 CLASP2O75122 1294 aaKnown RBP8.09□□□□□ -1.11
BRCA1-214ENST00000477152 ERLIN2O94905 339 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 CTSAP10619 480 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 AVPR2P30518 371 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 KCNC3Q14003 757 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 NTRK3Q16288 839 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 PPP4R3AQ6IN85 833 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 KIAA1841Q6NSI8 718 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 LRRC55Q6ZSA7 311 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 SLFN12Q8IYM2 578 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 C1orf127Q8N9H9 656 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 STAMQ92783 540 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 ATOH1Q92858 354 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-214ENST00000477152 LENG9Q96B70 501 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 CCDC51Q96ER9 411 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 ABHD17AQ96GS6 310 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 NLRP4Q96MN2 994 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 FDXACB1Q9BRP7 624 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-214ENST00000477152 TM6SF1Q9BZW5 370 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 NUCKS1Q9H1E3 243 aaKnown RBP8.09□□□□□ -1.11
BRCA1-214ENST00000477152 SFXN1Q9H9B4 322 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 HCFC2Q9Y5Z7 792 aa8.09□□□□□ -1.11
BRCA1-214ENST00000477152 MUC6Q6W4X9 2439 aa8.09□□□□□ -1.12
BRCA1-214ENST00000477152 IGKV6-21A0A0C4DH24 114 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 HIDE1A8MVS5 230 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 CREMQ03060 361 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 MRPL58Q14197 206 aaKnown RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 MXD4Q14582 209 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 ANKRD1Q15327 319 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 CLLU1OSQ5K130 101 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 SYCE2Q6PIF2 218 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 NEK8Q86SG6 692 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 KREMEN2Q8NCW0 462 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 IGSF21Q96ID5 467 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 CEP170P1Q96L14 293 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 IRX2Q9BZI1 471 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 CHRDQ9H2X0 955 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 CYP26B1Q9NR63 512 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 MRPL17Q9NRX2 175 aaKnown RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 INPP5FQ9Y2H2 1132 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 FAN1Q9Y2M0 1017 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 PCDHGC5Q9Y5F6 944 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 COL4A3BPQ9Y5P4 624 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 EFSO43281 561 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 URODP06132 367 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 MAPTP10636 758 aaKnown RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 CPA1P15085 419 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 KLRC2P26717 231 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 PPP2R5CQ13362 524 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 LETM2Q2VYF4 491 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 RARS2Q5T160 578 aaKnown RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 CCDC149Q6ZUS6 474 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 MBOAT7Q96N66 472 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 APOL5Q9BWW9 433 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 TRIM6Q9C030 488 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-214ENST00000477152 ZBP1Q9H171 429 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 ZSWIM4Q9H7M6 989 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 RSAD1Q9HA92 442 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 AGPAT5Q9NUQ2 364 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 FNDC3AQ9Y2H6 1198 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms