RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 C1orf220Q5T0J3 134 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 FBXW10Q5XX13 1052 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 KCTD16Q68DU8 428 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 RHBDF2Q6PJF5 856 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L6PQ6QN14 398 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 POTEGQ6S5H5 508 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 TMEM179Q6ZVK1 233 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 PEX26Q7Z412 305 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 DDX42Q86XP3 938 aaKnown RBP eCLIP7.39□□□□□ -1.23
UBR4-212ENST00000475973 NELFCDQ8IXH7 590 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 CCDC13Q8IYE1 715 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 FUKQ8N0W3 1084 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 OTUD6BQ8N6M0 293 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 ERMNQ8TAM6 284 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 IFT81Q8WYA0 676 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 DPF3Q92784 378 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 GJA10Q969M2 543 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 SEC16BQ96JE7 1060 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 XPO6Q96QU8 1125 aaKnown RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 APBA2Q99767 749 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 RUSC1Q9BVN2 902 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 TANGO6Q9C0B7 1094 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.39□□□□□ -1.23
UBR4-212ENST00000475973 DDX47Q9H0S4 455 aaKnown RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 KANSL2Q9H9L4 492 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 LRRC4CQ9HCJ2 640 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 PAK6Q9NQU5 681 aaPredicted RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 AMACRQ9UHK6 382 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 ODF2LQ9ULJ1 636 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 PPP1R9AQ9ULJ8 1098 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 COG5Q9UP83 839 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 SLC12A4Q9UP95 1085 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 COQ4Q9Y3A0 265 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 RABGAP1Q9Y3P9 1069 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 NR2E3Q9Y5X4 410 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 CAPN7Q9Y6W3 813 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 IVNS1ABPQ9Y6Y0 642 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 TMCO5BA8MYB1 307 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 EML1O00423 815 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 KRIT1O00522 736 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 TNRC18O15417 2968 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 TTI1O43156 1089 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 LYPLA2O95372 231 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 SGPL1O95470 568 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 AGTP01019 485 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 FBXO45P0C2W1 286 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 ALADP13716 330 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 CYP2B6P20813 491 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 CHRNA3P32297 505 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 CTNNA1P35221 906 aaKnown RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 STAT3P40763 770 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 RGS2P41220 211 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 ICA1Q05084 483 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 CTTNQ14247 550 aaKnown RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 SHROOM1Q2M3G4 852 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 MSS51Q4VC12 460 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 EPC2Q52LR7 807 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 HABP4Q5JVS0 413 aaKnown RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 KIAA1755Q5JYT7 1200 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 WDR78Q5VTH9 848 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 TLDC1Q6P9B6 456 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 CRELD2Q6UXH1 353 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 VPS36Q86VN1 386 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 RELL1Q8IUW5 271 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 RHOT2Q8IXI1 618 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 DAW1Q8N136 415 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 PRELID2Q8N945 189 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 SLC35G2Q8TBE7 412 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 ALG3Q92685 438 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 ARHGEF26Q96DR7 871 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 SGSM3Q96HU1 749 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 RUNDC3BQ96NL0 473 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 DEFB118Q96PH6 123 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 SPAG5Q96R06 1193 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 NAP1L3Q99457 506 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 EIF2AK1Q9BQI3 630 aaKnown RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 AMNQ9BXJ7 453 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 ROPN1BQ9BZX4 212 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 RAB17Q9H0T7 212 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 RPAP3Q9H6T3 665 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 BCAS3Q9H6U6 928 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 ROPN1Q9HAT0 212 aaPredicted RBP7.38□□□□□ -1.23
UBR4-212ENST00000475973 ARHGEF10LQ9HCE6 1279 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 ERVK-5Q9HDB9 667 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 SLC40A1Q9NP59 571 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 KLC4Q9NSK0 619 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 EURLQ9NYK6 297 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 PCDH10Q9P2E7 1040 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 APEX2Q9UBZ4 518 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 AMFRQ9UKV5 643 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 PCDHA1Q9Y5I3 950 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 LOC285556D6RIA3 1793 aa7.38□□□□□ -1.23
UBR4-212ENST00000475973 MYH4Q9Y623 1939 aa7.37□□□□□ -1.23
UBR4-212ENST00000475973 ZBBXA8MT70 800 aa7.37□□□□□ -1.23
UBR4-212ENST00000475973 RSPH10B2B2RC85 870 aa7.37□□□□□ -1.23
UBR4-212ENST00000475973 PODXLO00592 558 aa7.37□□□□□ -1.23
UBR4-212ENST00000475973 FSCN2O14926 492 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms