RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 MYCT1Q8N699 235 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 CEP120Q8N960 986 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 SLC22A17Q8WUG5 538 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 BICD1Q96G01 975 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 UROC1Q96N76 676 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 USP28Q96RU2 1077 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ADAM7Q9H2U9 754 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 PTPRHQ9HD43 1115 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 CHST7Q9NS84 486 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 STK17AQ9UEE5 414 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 DPP7Q9UHL4 492 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ZFHX4Q86UP3 3567 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 CEP250Q9BV73 2442 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 HNRNPDLO14979 420 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 TRAK2O60296 914 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 KIF4AO95239 1232 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 BRD1O95696 1058 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 GLUD1P00367 558 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 NBL1P41271 181 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 MTHFRP42898 656 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 ZNF131P52739 623 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 NUBP1P53384 320 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 OSTNP61366 133 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 STK38Q15208 465 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 SPECC1Q5M775 1068 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 KIAA0319Q5VV43 1072 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 KRI1Q8N9T8 703 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 LRRC15Q8TF66 581 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 HASPINQ8TF76 798 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 RABGGTAQ92696 567 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 KCNN1Q92952 543 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 EPSTI1Q96J88 318 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 ZNF396Q96N95 335 aaPredicted RBP12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 ACAP3Q96P50 834 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 PPP1R10Q96QC0 940 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 GPR62Q9BZJ7 368 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 ZHX3Q9H4I2 956 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 RXFP1Q9HBX9 757 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 NR2E1Q9Y466 385 aa12.46□□□□□ -0.41
NUDCD3-206ENST00000475952 TMEM189-UBE2V1I3L0A0 370 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 ABLIM1O14639 778 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 TEX28O15482 410 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 CLDN3O15551 220 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 DDIT3P35638 169 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 LIG4P49917 911 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 SLC39A14Q15043 492 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 ATAT1Q5SQI0 421 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 FAM171A1Q5VUB5 890 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 RRAGBQ5VZM2 374 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 PDXDC1Q6P996 788 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 TAS1R1Q7RTX1 841 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 RIN2Q8WYP3 895 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 B3GALT6Q96L58 329 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 CLIC6Q96NY7 704 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 TTPALQ9BTX7 342 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 CXCL16Q9H2A7 254 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 MAN1C1Q9NR34 630 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 FNIP2Q9P278 1114 aa12.45□□□□□ -0.42
NUDCD3-206ENST00000475952 SMIM28A0A1B0GU29 152 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 B3GAT3O94766 335 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 C1RP00736 705 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 STAT6P42226 847 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 CLCNKBP51801 687 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 MCL1Q07820 350 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 KYAT1Q16773 422 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 XKR4Q5GH76 650 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 RTP2Q5QGT7 225 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 DCLRE1AQ6PJP8 1040 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 C15orf39Q6ZRI6 1047 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 USP49Q70CQ1 688 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 CEP57Q86XR8 500 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 C12orf76Q8N812 135 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 HDAC7Q8WUI4 952 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 ZBTB45Q96K62 511 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 CNTN3Q9P232 1028 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 TBX20Q9UMR3 447 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 NOTCH4Q99466 2003 aa12.44□□□□□ -0.42
NUDCD3-206ENST00000475952 TPRP12270 2363 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 SPTLC2O15270 562 aa12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 TRAPPC3O43617 180 aa12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 PPP6R2O75170 966 aa12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 PIGRP01833 764 aa12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 KCNE1P15382 129 aa12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 SP100P23497 879 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 ID4P47928 161 aa12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 PSMD5Q16401 504 aa12.43□□□□□ -0.42
NUDCD3-206ENST00000475952 UPP1Q16831 310 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms