RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CTDNEP1O95476 244 aa22.55■■□□□ 1.2
VPS36-203ENST00000475375 RHOP08100 348 aa22.55■■□□□ 1.2
VPS36-203ENST00000475375 TKTP29401 623 aaKnown RBP22.55■■□□□ 1.2
VPS36-203ENST00000475375 FOSBP53539 338 aa22.55■■□□□ 1.2
VPS36-203ENST00000475375 BSNDQ8WZ55 320 aa22.55■■□□□ 1.2
VPS36-203ENST00000475375 GDE1Q9NZC3 331 aa22.55■■□□□ 1.2
VPS36-203ENST00000475375 USP18Q9UMW8 372 aa22.55■■□□□ 1.2
VPS36-203ENST00000475375 I3L4J1 428 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 ACKR2O00590 384 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 LRG1P02750 347 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 SLC5A9Q2M3M2 681 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 DCAF4L1Q3SXM0 396 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 EEF1DP3Q658K8 133 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 ANKS3Q6ZW76 656 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 RTL10Q7L3V2 364 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 ZBTB44Q8NCP5 570 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 CLDN23Q96B33 292 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 CNTNAP3BQ96NU0 1288 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 NACC1Q96RE7 527 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 CNTNAP3Q9BZ76 1288 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 PLA2G2FQ9BZM2 168 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 CDV3Q9UKY7 258 aaKnown RBP22.54■■□□□ 1.2
VPS36-203ENST00000475375 PATJQ8NI35 1801 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 SPTBN2O15020 2390 aa22.54■■□□□ 1.2
VPS36-203ENST00000475375 CACNA1BQ00975 2339 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 ARHGEF35A5YM69 484 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 WNT7AO00755 349 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 PRRG1O14668 218 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 TRAPPC3O43617 180 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 SPATA31C1P0DKV0 1188 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 CEBPBP17676 345 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 IGFBP6P24592 240 aaPredicted RBP22.53■■□□□ 1.2
VPS36-203ENST00000475375 ELF1P32519 619 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 RPS9P46781 194 aaKnown RBP22.53■■□□□ 1.2
VPS36-203ENST00000475375 CLCNKBP51801 687 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 LMNB2Q03252 620 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 TANGO2Q6ICL3 276 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 PADI6Q6TGC4 694 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 CATSPER3Q86XQ3 398 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 MTMR9Q96QG7 549 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 EPC1Q9H2F5 836 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 TUFT1Q9NNX1 390 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 NDRG2Q9UN36 371 aaKnown RBP22.53■■□□□ 1.2
VPS36-203ENST00000475375 BACE2Q9Y5Z0 518 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 VWA8A3KMH1 1905 aa22.53■■□□□ 1.2
VPS36-203ENST00000475375 BTBD18B2RXH4 712 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 TMEM189-UBE2V1I3L0A0 370 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 PTPN2P17706 415 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 NAMPTP43490 491 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 RBM25P49756 843 aaKnown RBP22.52■■□□□ 1.2
VPS36-203ENST00000475375 ATXN1P54253 815 aaKnown RBP22.52■■□□□ 1.2
VPS36-203ENST00000475375 ADCY1Q08828 1119 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 GRM2Q14416 872 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 DDX27Q96GQ7 796 aaKnown RBP22.52■■□□□ 1.2
VPS36-203ENST00000475375 UROC1Q96N76 676 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 CCDC113Q9H0I3 377 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 BRD9Q9H8M2 597 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 GOLGA2P5Q9HBQ8 144 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 GMEB2Q9UKD1 530 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 EPG5Q9HCE0 2579 aa22.52■■□□□ 1.2
VPS36-203ENST00000475375 TPRP12270 2363 aaKnown RBP22.52■■□□□ 1.19
VPS36-203ENST00000475375 PRR5-ARHGAP8B1AHC4 643 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 LILRB5O75023 590 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 MED24O75448 989 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 EDN1P05305 212 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 MCM7P33993 719 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 BRCC3P46736 316 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 ARPP19P56211 112 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 ARHGAP8P85298 464 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 MTAPQ13126 283 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 TRIM29Q14134 588 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 PPP2R5AQ15172 486 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 APBB1IPQ7Z5R6 666 aaPredicted RBP22.51■■□□□ 1.19
VPS36-203ENST00000475375 DIS3L2Q8IYB7 885 aaKnown RBP22.51■■□□□ 1.19
VPS36-203ENST00000475375 ELSPBP1Q96BH3 223 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 PPP1R10Q96QC0 940 aaKnown RBP22.51■■□□□ 1.19
VPS36-203ENST00000475375 CORO1BQ9BR76 489 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 KIFC3Q9BVG8 833 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 TMEM60Q9H2L4 133 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 PRMT8Q9NR22 394 aaPredicted RBP22.51■■□□□ 1.19
VPS36-203ENST00000475375 RAB23Q9ULC3 237 aa22.51■■□□□ 1.19
VPS36-203ENST00000475375 NOTCH4Q99466 2003 aa22.5■■□□□ 1.19
VPS36-203ENST00000475375 TBC1D4O60343 1298 aa22.5■■□□□ 1.19
VPS36-203ENST00000475375 FDPSP14324 419 aaKnown RBP22.5■■□□□ 1.19
VPS36-203ENST00000475375 CYP11B2P19099 503 aa22.5■■□□□ 1.19
VPS36-203ENST00000475375 UPP1Q16831 310 aa22.5■■□□□ 1.19
VPS36-203ENST00000475375 NECAB1Q8N987 351 aa22.5■■□□□ 1.19
VPS36-203ENST00000475375 DNASE1L2Q92874 299 aa22.5■■□□□ 1.19
VPS36-203ENST00000475375 IFT74Q96LB3 600 aa22.5■■□□□ 1.19
VPS36-203ENST00000475375 FAM126AQ9BYI3 521 aaPredicted RBP22.5■■□□□ 1.19
VPS36-203ENST00000475375 MAN2B1O00754 1011 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 EFNA5P52803 228 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 YARSP54577 528 aaKnown RBP22.49■■□□□ 1.19
VPS36-203ENST00000475375 ROR1Q01973 937 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 ANKRD1Q15327 319 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 ATF7IP2Q5U623 682 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 C3orf58Q8NDZ4 430 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 ERMNQ8TAM6 284 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 NELL1Q92832 810 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 CYP4F11Q9HBI6 524 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms