RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 CACNA1IQ9P0X4 2223 aa19.63■□□□□ 0.73
PCGF3-209ENST00000475288 SPTLC1O15269 473 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 KINO60870 393 aaKnown RBP19.62■□□□□ 0.73
PCGF3-209ENST00000475288 ECI2O75521 394 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 B3GAT3O94766 335 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 OR52Z1P0C646 297 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 SAFBQ15424 915 aaKnown RBP eCLIP19.62■□□□□ 0.73
PCGF3-209ENST00000475288 XKR4Q5GH76 650 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 HAUS3Q68CZ6 603 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 CD300LGQ6UXG3 332 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 SUMF1Q8NBK3 374 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 IFT74Q96LB3 600 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 NELL2Q99435 816 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 CDY1Q9Y6F8 540 aa19.62■□□□□ 0.73
PCGF3-209ENST00000475288 ARHGEF37A1IGU5 675 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 JAK2O60674 1132 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 CLCNKBP51801 687 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 PUM1Q14671 1186 aaKnown RBP eCLIP19.61■□□□□ 0.73
PCGF3-209ENST00000475288 NT5DC1Q5TFE4 455 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 ATF7IP2Q5U623 682 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 SLC8B1Q6J4K2 584 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 ST13P5Q8NFI4 369 aaPredicted RBP19.61■□□□□ 0.73
PCGF3-209ENST00000475288 CLDN23Q96B33 292 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 LTB4R2Q9NPC1 389 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 HCFC1R1Q9NWW0 138 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 TNFSF13BQ9Y275 285 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 GDAQ9Y2T3 454 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 PCDHGA2Q9Y5H1 932 aa19.61■□□□□ 0.73
PCGF3-209ENST00000475288 PHLPP2Q6ZVD8 1323 aa19.6■□□□□ 0.73
PCGF3-209ENST00000475288 LAMTOR5O43504 91 aa19.6■□□□□ 0.73
PCGF3-209ENST00000475288 LRRN2O75325 713 aa19.6■□□□□ 0.73
PCGF3-209ENST00000475288 RPS9P46781 194 aaKnown RBP19.6■□□□□ 0.73
PCGF3-209ENST00000475288 KIAA2013Q8IYS2 634 aa19.6■□□□□ 0.73
PCGF3-209ENST00000475288 ZNF461Q8TAF7 563 aa19.6■□□□□ 0.73
PCGF3-209ENST00000475288 DDX27Q96GQ7 796 aaKnown RBP19.6■□□□□ 0.73
PCGF3-209ENST00000475288 TOPORSQ9NS56 1045 aaPredicted RBP19.6■□□□□ 0.73
PCGF3-209ENST00000475288 DLL3Q9NYJ7 618 aa19.6■□□□□ 0.73
PCGF3-209ENST00000475288 USP20Q9Y2K6 914 aa19.6■□□□□ 0.73
PCGF3-209ENST00000475288 MRPS23Q9Y3D9 190 aaKnown RBP19.6■□□□□ 0.73
PCGF3-209ENST00000475288 SMIM28A0A1B0GU29 152 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 FAM170BA6NMN3 283 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 MICAL2O94851 1124 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 ABLIM3O94929 683 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 TKTP29401 623 aaKnown RBP19.59■□□□□ 0.73
PCGF3-209ENST00000475288 GRM5P41594 1212 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 TRAPPC10P48553 1259 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 FXR2P51116 673 aaKnown RBP eCLIP19.59■□□□□ 0.73
PCGF3-209ENST00000475288 UBXN2BQ14CS0 331 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 GLRA4Q5JXX5 417 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 ALKAL1Q6UXT8 129 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 DGLUCYQ7Z3D6 616 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 C3orf58Q8NDZ4 430 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 NELL1Q92832 810 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 DNASE1L2Q92874 299 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 ELSPBP1Q96BH3 223 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 KXD1Q9BQD3 176 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 FOXP1Q9H334 677 aaPredicted RBP19.59■□□□□ 0.73
PCGF3-209ENST00000475288 SLC38A7Q9NVC3 462 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 SPATA6Q9NWH7 488 aaPredicted RBP19.59■□□□□ 0.73
PCGF3-209ENST00000475288 STK24Q9Y6E0 443 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 COL4A3Q01955 1670 aa19.59■□□□□ 0.73
PCGF3-209ENST00000475288 TRIP11Q15643 1979 aa19.58■□□□□ 0.73
PCGF3-209ENST00000475288 K7ERI5 159 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 SYN3O14994 580 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 NCAM2O15394 837 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 TBC1D4O60343 1298 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 EIF5BO60841 1220 aaKnown RBP19.58■□□□□ 0.72
PCGF3-209ENST00000475288 RHOP08100 348 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 IGFBP6P24592 240 aaPredicted RBP19.58■□□□□ 0.72
PCGF3-209ENST00000475288 YARSP54577 528 aaKnown RBP19.58■□□□□ 0.72
PCGF3-209ENST00000475288 ST3GAL1Q11201 340 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 ZBTB41Q5SVQ8 909 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 GPR161Q8N6U8 529 aaKnown RBP19.58■□□□□ 0.72
PCGF3-209ENST00000475288 ZBTB44Q8NCP5 570 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 HINFPQ9BQA5 517 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 KIFC3Q9BVG8 833 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 CCDC94Q9BW85 323 aaPredicted RBP19.58■□□□□ 0.72
PCGF3-209ENST00000475288 BHMT2Q9H2M3 363 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 TMEM134Q9H6X4 195 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 PTPRHQ9HD43 1115 aa19.58■□□□□ 0.72
PCGF3-209ENST00000475288 MTF2Q9Y483 593 aaPredicted RBP19.58■□□□□ 0.72
PCGF3-209ENST00000475288 ATF2P15336 505 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 KCNE1P15382 129 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 PTPN2P17706 415 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 LIG1P18858 919 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 FOSBP53539 338 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 ROR1Q01973 937 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 SLC5A9Q2M3M2 681 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 TCEAL8Q8IYN2 117 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 ACO2Q99798 780 aaKnown RBP19.57■□□□□ 0.72
PCGF3-209ENST00000475288 CDT1Q9H211 546 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 MAFFQ9ULX9 164 aa19.57■□□□□ 0.72
PCGF3-209ENST00000475288 MRPS17Q9Y2R5 130 aaKnown RBP19.57■□□□□ 0.72
PCGF3-209ENST00000475288 LILRB5O75023 590 aa19.56■□□□□ 0.72
PCGF3-209ENST00000475288 LRG1P02750 347 aa19.56■□□□□ 0.72
PCGF3-209ENST00000475288 TARSP26639 723 aaKnown RBP19.56■□□□□ 0.72
PCGF3-209ENST00000475288 CCT6AP40227 531 aaKnown RBP19.56■□□□□ 0.72
PCGF3-209ENST00000475288 NEK4P51957 841 aa19.56■□□□□ 0.72
PCGF3-209ENST00000475288 MRPL58Q14197 206 aaKnown RBP19.56■□□□□ 0.72
PCGF3-209ENST00000475288 PDIA5Q14554 519 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms