RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PDCD11Q14690 1871 aaKnown RBP18.42■□□□□ 0.54
SCAF11-206ENST00000474828 PLXNA4Q9HCM2 1894 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 BMP6P22004 513 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 LRPAP1P30533 357 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 RPL9P32969 192 aaKnown RBP18.42■□□□□ 0.54
SCAF11-206ENST00000474828 MATR3P43243 847 aaKnown RBP eCLIP18.42■□□□□ 0.543e-6■■□□□ 12.9
SCAF11-206ENST00000474828 ACOT2P49753 483 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 SOX4Q06945 474 aaPredicted RBP18.42■□□□□ 0.54
SCAF11-206ENST00000474828 MORC3Q14149 939 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 COL19A1Q14993 1142 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 PTPROQ16827 1216 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 UPP1Q16831 310 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 SPOUT1Q5T280 376 aaKnown RBP18.42■□□□□ 0.54
SCAF11-206ENST00000474828 ARMCX5Q6P1M9 558 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 CD300LGQ6UXG3 332 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 NT5DC4Q86YG4 428 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 NELFCDQ8IXH7 590 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 GPD1LQ8N335 351 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 CLSTN2Q9H4D0 955 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 ALG13Q9NP73 1137 aaKnown RBP18.42■□□□□ 0.54
SCAF11-206ENST00000474828 HSPBP1Q9NZL4 362 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 KIAA1468Q9P260 1216 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 MAN1B1Q9UKM7 699 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 CITO14578 2027 aa18.42■□□□□ 0.54
SCAF11-206ENST00000474828 IL18RAPO95256 599 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 KRT17Q04695 432 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 PPP2R3AQ06190 1150 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 HSP90AA2PQ14568 343 aaPredicted RBP18.41■□□□□ 0.54
SCAF11-206ENST00000474828 GLRA4Q5JXX5 417 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 SPATA1Q5VX52 437 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 CENPPQ6IPU0 288 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 ADSSL1Q8N142 457 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 TRIML1Q8N9V2 468 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 GPT2Q8TD30 523 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 POF1BQ8WVV4 589 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 ERCC4Q92889 916 aaPredicted RBP18.41■□□□□ 0.54
SCAF11-206ENST00000474828 DDX27Q96GQ7 796 aaKnown RBP18.41■□□□□ 0.54
SCAF11-206ENST00000474828 PAAF1Q9BRP4 392 aa18.41■□□□□ 0.54
SCAF11-206ENST00000474828 NT5C1B-RDH14C9J2C7 533 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 GOLGA6L22H0YM25 854 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 LILRB3O75022 631 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 FOSL2P15408 326 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 PRCPP42785 496 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 WNT7BP56706 349 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
SCAF11-206ENST00000474828 EDRF1Q3B7T1 1238 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 DCLRE1AQ6PJP8 1040 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 ZC3H3Q8IXZ2 948 aaKnown RBP18.4■□□□□ 0.54
SCAF11-206ENST00000474828 XXYLT1Q8NBI6 393 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 TMEM169Q96HH4 297 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 FAM213AQ9BRX8 229 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 COLEC11Q9BWP8 271 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
SCAF11-206ENST00000474828 ZBP1Q9H171 429 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 CHST7Q9NS84 486 aa18.4■□□□□ 0.54
SCAF11-206ENST00000474828 PUF60Q9UHX1 559 aaKnown RBP18.4■□□□□ 0.54
SCAF11-206ENST00000474828 UBQLN1Q9UMX0 589 aaKnown RBP18.4■□□□□ 0.54
SCAF11-206ENST00000474828 ANK1P16157 1881 aa18.39■□□□□ 0.54
SCAF11-206ENST00000474828 ATG2AQ2TAZ0 1938 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 TRIP11Q15643 1979 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 F8W810 466 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 MAPK13O15264 365 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 PPP1R2P41236 205 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 OR1G1P47890 313 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 ERVFC1P60507 584 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 CLDN10P78369 228 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 ENPEPQ07075 957 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 TIGD5Q53EQ6 642 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
SCAF11-206ENST00000474828 CBWD2Q8IUF1 395 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.39■□□□□ 0.53
SCAF11-206ENST00000474828 C18orf25Q96B23 403 aaPredicted RBP18.39■□□□□ 0.53
SCAF11-206ENST00000474828 SAAL1Q96ER3 474 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 MFSD14AQ96MC6 490 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 PCIF1Q9H4Z3 704 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 NGRNQ9NPE2 291 aaKnown RBP18.39■□□□□ 0.53
SCAF11-206ENST00000474828 TLR9Q9NR96 1032 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 ADAM28Q9UKQ2 775 aa18.39■□□□□ 0.53
SCAF11-206ENST00000474828 A0A0C4DFX4 3053 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 ANO9A1A5B4 782 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 CASTOR2A6NHX0 329 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 ZNF233A6NK53 670 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 CLIC2O15247 247 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 KIF4AO95239 1232 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 SOD2P04179 222 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 CTSAP10619 480 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 PAX3P23760 479 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 AARSP49588 968 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCAF11-206ENST00000474828 CLCNKBP51801 687 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 SNRNP35Q16560 246 aaKnown RBP18.38■□□□□ 0.53
SCAF11-206ENST00000474828 JADE1Q6IE81 842 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 EFCAB13Q8IY85 973 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 SMYD4Q8IYR2 804 aaPredicted RBP18.38■□□□□ 0.53
SCAF11-206ENST00000474828 C3orf58Q8NDZ4 430 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 CXorf38Q8TB03 319 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 HERC2P3Q9BVR0 1158 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 RBAKQ9NYW8 714 aaPredicted RBP18.38■□□□□ 0.53
SCAF11-206ENST00000474828 TUBGCP4Q9UGJ1 667 aa18.38■□□□□ 0.53
SCAF11-206ENST00000474828 PPP1R3GB7ZBB8 358 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 XPOTO43592 962 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms