RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 MTF1Q14872 753 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 DUOXA2Q1HG44 320 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 CYP26C1Q6V0L0 522 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 SPAG5Q96R06 1193 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 SPTLC3Q9NUV7 552 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 ANK1P16157 1881 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 BRCA2P51587 3418 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 GPR182O15218 404 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 CD52P31358 61 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 PIK3CAP42336 1068 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 LPIN1Q14693 890 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 SFMBT2Q5VUG0 894 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 SCARA3Q6AZY7 606 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 RAD9BQ6WBX8 426 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 FAM126BQ8IXS8 530 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 PI4K2AQ9BTU6 479 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 NUCKS1Q9H1E3 243 aaKnown RBP21.9■■□□□ 1.1
EDEM3-206ENST00000474725 NXF3Q9H4D5 531 aaKnown RBP21.9■■□□□ 1.1
EDEM3-206ENST00000474725 ERVK-5Q9HDB9 667 aa21.9■■□□□ 1.1
EDEM3-206ENST00000474725 UBE2TQ9NPD8 197 aaPredicted RBP21.9■■□□□ 1.1
EDEM3-206ENST00000474725 PHACTR2O75167 634 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 NFICP08651 508 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 JAM2P57087 298 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 TWF2Q6IBS0 349 aaKnown RBP21.89■■□□□ 1.09
EDEM3-206ENST00000474725 JADE1Q6IE81 842 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 TRAPPC11Q7Z392 1133 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 SYN2Q92777 582 aaPredicted RBP21.89■■□□□ 1.09
EDEM3-206ENST00000474725 STK33Q9BYT3 514 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 ASB7Q9H672 318 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 PADI3Q9ULW8 664 aa21.89■■□□□ 1.09
EDEM3-206ENST00000474725 TMEM191BP0C7N4 346 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 TRAF7Q6Q0C0 670 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 TATDN2Q93075 761 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 MYO6Q9UM54 1294 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 DAAM1Q9Y4D1 1078 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 CST3P01034 146 aaPredicted RBP21.88■■□□□ 1.09
EDEM3-206ENST00000474725 ATN1P54259 1190 aaPredicted RBP21.88■■□□□ 1.09
EDEM3-206ENST00000474725 DRAP1Q14919 205 aaPredicted RBP21.88■■□□□ 1.09
EDEM3-206ENST00000474725 ARHGAP44Q17R89 818 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 KAT5Q92993 513 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 ANKRD36BP1Q96IX9 119 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 NT5C1BQ96P26 610 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 APOL6Q9BWW8 343 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 CXCL16Q9H2A7 254 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 CHST12Q9NRB3 414 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 AIPL1Q9NZN9 384 aa21.88■■□□□ 1.09
EDEM3-206ENST00000474725 CD4P01730 458 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 TNNC2P02585 160 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 PNMA6AP0CW24 399 aaPredicted RBP21.87■■□□□ 1.09
EDEM3-206ENST00000474725 RFX1P22670 979 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 AKAP5P24588 427 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 CDK17Q00537 523 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 PAK2Q13177 524 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 SMG8Q8ND04 991 aaKnown RBP21.87■■□□□ 1.09
EDEM3-206ENST00000474725 HELQQ8TDG4 1101 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 GPR88Q9GZN0 384 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 RNF39Q9H2S5 420 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 R3HCC1Q9Y3T6 440 aaKnown RBP21.87■■□□□ 1.09
EDEM3-206ENST00000474725 IPPQ9Y573 584 aa21.87■■□□□ 1.09
EDEM3-206ENST00000474725 ZC3H11AO75152 810 aaKnown RBP eCLIP21.86■■□□□ 1.09
EDEM3-206ENST00000474725 RECQL4O94761 1208 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 PLEKP08567 350 aaPredicted RBP21.86■■□□□ 1.09
EDEM3-206ENST00000474725 KCNJ6P48051 423 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 YARSP54577 528 aaKnown RBP21.86■■□□□ 1.09
EDEM3-206ENST00000474725 ARID5AQ03989 594 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 NCOA4Q13772 614 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 ASIC2Q16515 512 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 WDR44Q5JSH3 913 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 SLC39A5Q6ZMH5 540 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 TOGARAM2Q6ZUX3 1019 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 CD302Q8IX05 232 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 TMEM130Q8N3G9 435 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 PPM1KQ8N3J5 372 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 SNX27Q96L92 541 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 PLEKHA5Q9HAU0 1116 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 ARHGAP20Q9P2F6 1191 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 SQORQ9Y6N5 450 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 F8VZ95 297 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 PQBP1O60828 265 aaKnown RBP21.86■■□□□ 1.09
EDEM3-206ENST00000474725 STAT1P42224 750 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 TMEM132DQ14C87 1099 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 HGSNATQ68CP4 663 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 SPOPLQ6IQ16 392 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 CAGE1Q8TC20 777 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 KREMEN1Q96MU8 473 aa21.86■■□□□ 1.09
EDEM3-206ENST00000474725 NHEJ1Q9H9Q4 299 aaPredicted RBP21.86■■□□□ 1.09
EDEM3-206ENST00000474725 ZSCAN20P17040 1043 aaPredicted RBP21.85■■□□□ 1.09
EDEM3-206ENST00000474725 GJA8P48165 433 aa21.85■■□□□ 1.09
EDEM3-206ENST00000474725 MBTPS1Q14703 1052 aa21.85■■□□□ 1.09
EDEM3-206ENST00000474725 DNTTIP2Q5QJE6 756 aaKnown RBP21.85■■□□□ 1.09
EDEM3-206ENST00000474725 IRF2BP2Q7Z5L9 587 aa21.85■■□□□ 1.09
EDEM3-206ENST00000474725 USP38Q8NB14 1042 aa21.85■■□□□ 1.09
EDEM3-206ENST00000474725 DIS3LQ8TF46 1054 aaKnown RBP21.85■■□□□ 1.09
EDEM3-206ENST00000474725 PARP2Q9UGN5 583 aa21.85■■□□□ 1.09
EDEM3-206ENST00000474725 PCDHB2Q9Y5E7 798 aa21.85■■□□□ 1.09
EDEM3-206ENST00000474725 FOXN3O00409 490 aaPredicted RBP21.84■■□□□ 1.09
EDEM3-206ENST00000474725 SOX5P35711 763 aa21.84■■□□□ 1.09
EDEM3-206ENST00000474725 MYL6P60660 151 aa21.84■■□□□ 1.09
EDEM3-206ENST00000474725 ALKAL1Q6UXT8 129 aa21.84■■□□□ 1.09
EDEM3-206ENST00000474725 C1orf127Q8N9H9 656 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms