RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 AVPR2P30518 371 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 VCPP55072 806 aaKnown RBP16.55■□□□□ 0.24
VARS-223ENST00000474643 TMEM119Q4V9L6 283 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 RTP2Q5QGT7 225 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 PPM1LQ5SGD2 360 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 IER5LQ5T953 404 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 ATL3Q6DD88 541 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 RINT1Q6NUQ1 792 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.55■□□□□ 0.24
VARS-223ENST00000474643 PIK3R5Q8WYR1 880 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 EPSTI1Q96J88 318 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 SMOC2Q9H3U7 446 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 IGSF9Q9P2J2 1179 aa16.55■□□□□ 0.24
VARS-223ENST00000474643 H0YCG3 227 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 XYLBO75191 536 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 C1RP00736 705 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 PDGFBP01127 241 aaPredicted RBP16.54■□□□□ 0.24
VARS-223ENST00000474643 EDN1P05305 212 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 KRT18P05783 430 aaKnown RBP16.54■□□□□ 0.24
VARS-223ENST00000474643 GRM5P41594 1212 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 DNM1Q05193 864 aaKnown RBP16.54■□□□□ 0.24
VARS-223ENST00000474643 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 DCLRE1AQ6PJP8 1040 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 MPZL3Q6UWV2 235 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 SYT2Q8N9I0 419 aaPredicted RBP16.54■□□□□ 0.24
VARS-223ENST00000474643 PRSS33Q8NF86 280 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 KCNG4Q8TDN1 519 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 ATOH1Q92858 354 aaPredicted RBP16.54■□□□□ 0.24
VARS-223ENST00000474643 ACAP3Q96P50 834 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 ACO2Q99798 780 aaKnown RBP16.54■□□□□ 0.24
VARS-223ENST00000474643 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 CCSER1Q9C0I3 900 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 CDT1Q9H211 546 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 TMEM134Q9H6X4 195 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 KCNK12Q9HB15 430 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 NUB1Q9Y5A7 615 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
VARS-223ENST00000474643 TCHHQ07283 1943 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 PLXNA3P51805 1871 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 SFI1A8K8P3 1242 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 PPP6R2O75170 966 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 C8AP07357 584 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 GUCY2CP25092 1073 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 ME1P48163 572 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 CLCNKBP51801 687 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 NUCB2P80303 420 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 MCM6Q14566 821 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 USP49Q70CQ1 688 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 GPBP1Q86WP2 473 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 RAD54LQ92698 747 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 DDX27Q96GQ7 796 aaKnown RBP16.53■□□□□ 0.24
VARS-223ENST00000474643 TARS2Q9BW92 718 aaKnown RBP16.53■□□□□ 0.24
VARS-223ENST00000474643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.53■□□□□ 0.24
VARS-223ENST00000474643 KCND2Q9NZV8 630 aa16.53■□□□□ 0.24
VARS-223ENST00000474643 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
VARS-223ENST00000474643 MORC2Q9Y6X9 1032 aaPredicted RBP16.53■□□□□ 0.24
VARS-223ENST00000474643 CUTAO60888 179 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 ZMYND10O75800 440 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 EFEMP2O95967 443 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 MCF2P10911 925 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 PLS3P13797 630 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 FSHRP23945 695 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 ELF1P32519 619 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 OR1D2P34982 312 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 SLC12A3P55017 1021 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 KRT85P78386 507 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 NOLC1Q14978 699 aaKnown RBP eCLIP16.52■□□□□ 0.24
VARS-223ENST00000474643 CCDC73Q6ZRK6 1079 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 ANKS3Q6ZW76 656 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 C1orf186Q6ZWK4 172 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 CEP120Q8N960 986 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 SLC7A14Q8TBB6 771 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 FEZF2Q8TBJ5 459 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 LARP4BQ92615 738 aaKnown RBP16.52■□□□□ 0.24
VARS-223ENST00000474643 PPP1R10Q96QC0 940 aaKnown RBP16.52■□□□□ 0.24
VARS-223ENST00000474643 RHOBTB2Q9BYZ6 727 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 PANK2Q9BZ23 570 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 ZHX3Q9H4I2 956 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 GOLGA2P5Q9HBQ8 144 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 ARHGAP28Q9P2N2 729 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 DUSP12Q9UNI6 340 aa16.52■□□□□ 0.24
VARS-223ENST00000474643 ZDBF2Q9HCK1 2354 aa16.52■□□□□ 0.23
VARS-223ENST00000474643 DENND4AQ7Z401 1863 aa16.52■□□□□ 0.23
VARS-223ENST00000474643 ZNF318Q5VUA4 2279 aa16.52■□□□□ 0.23
VARS-223ENST00000474643 C2orf16Q68DN1 1984 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 SMIM28A0A1B0GU29 152 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 TMEM189-UBE2V1I3L0A0 370 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 CCL16O15467 120 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 CLDN3O15551 220 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 FAM13AO94988 1023 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 HNRNPA1P09651 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
VARS-223ENST00000474643 STAT6P42226 847 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 NUBP1P53384 320 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 CACNB1Q02641 598 aaPredicted RBP16.51■□□□□ 0.23
VARS-223ENST00000474643 ASTLQ6HA08 431 aaPredicted RBP16.51■□□□□ 0.23
VARS-223ENST00000474643 GRASPQ7Z6J2 395 aaPredicted RBP16.51■□□□□ 0.23
VARS-223ENST00000474643 DAW1Q8N136 415 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 SIX5Q8N196 739 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 PDILTQ8N807 584 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms