RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 REXO2Q9Y3B8 237 aaKnown RBP4.53□□□□□ -1.68
GAPVD1-216ENST00000474637 CNTNAP2Q9UHC6 1331 aa4.53□□□□□ -1.68
GAPVD1-216ENST00000474637 BRCA2P51587 3418 aa4.53□□□□□ -1.68
GAPVD1-216ENST00000474637 TET1Q8NFU7 2136 aa4.53□□□□□ -1.68
GAPVD1-216ENST00000474637 PTPRSQ13332 1948 aa4.53□□□□□ -1.69
GAPVD1-216ENST00000474637 MYH11P35749 1972 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 A0A0U1RQF3 1178 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 K7ERI5 159 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 SOX1O00570 391 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ACKR2O00590 384 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TSPAN1O60635 241 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 FGFR4P22455 802 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 OAS2P29728 719 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MTIF2P46199 727 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 NPTX2P47972 431 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 NCKAP1LP55160 1127 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PEX3P56589 373 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 STRN3Q13033 797 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MAPK7Q13164 816 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 GPS2Q13227 327 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PRPF4BQ13523 1007 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ALCAMQ13740 583 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 SMC1AQ14683 1233 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 AMHR2Q16671 573 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 LONRF2Q1L5Z9 754 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM132AQ24JP5 1023 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 DCAF4L1Q3SXM0 396 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ARSHQ5FYA8 562 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PPP2R2DQ66LE6 453 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TWF2Q6IBS0 349 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC27A1Q6PCB7 646 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 STXBP4Q6ZWJ1 553 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MRPL10Q7Z7H8 261 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 RTN4RL1Q86UN2 441 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ECHDC2Q86YB7 292 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC65Q8IXS2 484 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MYCT1Q8N699 235 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC47Q96A33 483 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF689Q96CS4 500 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 HVCN1Q96D96 273 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF668Q96K58 619 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PCMTD1Q96MG8 357 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 DNAJC7Q99615 494 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 REEP2Q9BRK0 252 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ADPGKQ9BRR6 497 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC113Q9H0I3 377 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ST6GALNAC4Q9H4F1 302 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MINDY3Q9H8M7 445 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC28A3Q9HAS3 691 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ARHGAP28Q9P2N2 729 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MYO6Q9UM54 1294 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 DUSP10Q9Y6W6 482 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 GBF1Q92538 1859 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 DNAH12Q6ZR08 3092 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 A0A1B0GUA9 196 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 BICDL2A1A5D9 508 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CTAGE15A4D2H0 777 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC151A5D8V7 595 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 RCCD1A6NED2 376 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MYMKA6NI61 221 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 GRXCR1A8MXD5 290 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 SRGAP2O75044 1071 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF623O75123 536 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 DGKIO75912 1065 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 UPP2O95045 317 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CTAGE8P0CG41 777 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 RABGGTBP53611 331 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM193AP78312 1265 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CYP27A1Q02318 531 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TUBB2AQ13885 445 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 KYAT1Q16773 422 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC122Q5T0U0 273 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ICE2Q659A1 982 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CTAGE6Q86UF2 777 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF598Q86UK7 904 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CTAGE4Q8IX94 777 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 DAW1Q8N136 415 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CRIPAKQ8N1N5 446 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 FIBCD1Q8N539 461 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 KIAA0895Q8NCT3 520 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 BSNDQ8WZ55 320 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 DDX12PQ92771 950 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 CNOT6LQ96LI5 555 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TGS1Q96RS0 853 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PNKPQ96T60 521 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TUBB2BQ9BVA1 445 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PLVAPQ9BX97 442 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MRPL9Q9BYD2 267 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MRPL4Q9BYD3 311 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TRIM6Q9C030 488 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 LACRTQ9GZZ8 138 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM117Q9H0C3 514 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 SEMA6BQ9H3T3 888 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 HAUS4Q9H6D7 363 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 NHEJ1Q9H9Q4 299 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ABCB6Q9NP58 842 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 AAASQ9NRG9 546 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM105AQ9NUU6 356 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNHIT6Q9NWK9 470 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms