RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 PRPHP41219 470 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 DMP1Q13316 513 aaPredicted RBP27.21■■□□□ 1.95
PKD1-211ENST00000474088 XKR4Q5GH76 650 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 RINT1Q6NUQ1 792 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 RSPO2Q6UXX9 243 aaPredicted RBP27.21■■□□□ 1.95
PKD1-211ENST00000474088 C1orf186Q6ZWK4 172 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 RPP25Q9BUL9 199 aaKnown RBP27.21■■□□□ 1.95
PKD1-211ENST00000474088 RUSC1Q9BVN2 902 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 MRPL4Q9BYD3 311 aaKnown RBP27.21■■□□□ 1.95
PKD1-211ENST00000474088 TBC1D17Q9HA65 648 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 KMT5AQ9NQR1 393 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 ARHGAP28Q9P2N2 729 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 RBM19Q9Y4C8 960 aaKnown RBP27.21■■□□□ 1.95
PKD1-211ENST00000474088 BACE2Q9Y5Z0 518 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 CDY1Q9Y6F8 540 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 VWA8A3KMH1 1905 aa27.2■■□□□ 1.95
PKD1-211ENST00000474088 POU2F2P09086 479 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 TKTP29401 623 aaKnown RBP27.2■■□□□ 1.94
PKD1-211ENST00000474088 BRCC3P46736 316 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 OSTNP61366 133 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 SOX4Q06945 474 aaPredicted RBP27.2■■□□□ 1.94
PKD1-211ENST00000474088 ZNF568Q3ZCX4 644 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 PHLDB3Q6NSJ2 640 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 PARM1Q6UWI2 310 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 DTHD1Q6ZMT9 781 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 TAS1R3Q7RTX0 852 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 C3orf58Q8NDZ4 430 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 FGF13Q92913 245 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 FGF14Q92915 247 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 NKD2Q969F2 451 aaPredicted RBP27.2■■□□□ 1.94
PKD1-211ENST00000474088 DRC1Q96MC2 740 aa27.2■■□□□ 1.94
PKD1-211ENST00000474088 MMTAG2Q9BU76 263 aaKnown RBP27.2■■□□□ 1.94
PKD1-211ENST00000474088 TARS2Q9BW92 718 aaKnown RBP27.2■■□□□ 1.94
PKD1-211ENST00000474088 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.2■■□□□ 1.94
PKD1-211ENST00000474088 CACNA1HO95180 2353 aa27.19■■□□□ 1.94
PKD1-211ENST00000474088 MAPK7Q13164 816 aa27.19■■□□□ 1.94
PKD1-211ENST00000474088 ANKS3Q6ZW76 656 aa27.19■■□□□ 1.94
PKD1-211ENST00000474088 RTL10Q7L3V2 364 aa27.19■■□□□ 1.94
PKD1-211ENST00000474088 KCNK18Q7Z418 384 aa27.19■■□□□ 1.94
PKD1-211ENST00000474088 DDX27Q96GQ7 796 aaKnown RBP27.19■■□□□ 1.94
PKD1-211ENST00000474088 C17orf75Q9HAS0 396 aa27.19■■□□□ 1.94
PKD1-211ENST00000474088 ARHGEF3Q9NR81 526 aa27.19■■□□□ 1.94
PKD1-211ENST00000474088 I3L4J1 428 aa27.18■■□□□ 1.94
PKD1-211ENST00000474088 ITFG1Q8TB96 612 aa27.18■■□□□ 1.94
PKD1-211ENST00000474088 ZMAT2Q96NC0 199 aaKnown RBP27.18■■□□□ 1.94
PKD1-211ENST00000474088 NTPCRQ9BSD7 190 aaKnown RBP27.18■■□□□ 1.94
PKD1-211ENST00000474088 TCHPQ9BT92 498 aa27.18■■□□□ 1.94
PKD1-211ENST00000474088 SLC38A7Q9NVC3 462 aa27.18■■□□□ 1.94
PKD1-211ENST00000474088 DNMT3BQ9UBC3 853 aaKnown RBP27.18■■□□□ 1.94
PKD1-211ENST00000474088 USP34Q70CQ2 3546 aa27.18■■□□□ 1.94
PKD1-211ENST00000474088 SFI1A8K8P3 1242 aa27.17■■□□□ 1.94
PKD1-211ENST00000474088 MCF2P10911 925 aa27.17■■□□□ 1.94
PKD1-211ENST00000474088 PROZP22891 400 aa27.17■■□□□ 1.94
PKD1-211ENST00000474088 GPC5P78333 572 aa27.17■■□□□ 1.94
PKD1-211ENST00000474088 ACAP3Q96P50 834 aa27.17■■□□□ 1.94
PKD1-211ENST00000474088 TIPINQ9BVW5 301 aa27.17■■□□□ 1.94
PKD1-211ENST00000474088 HCFC1R1Q9NWW0 138 aa27.17■■□□□ 1.94
PKD1-211ENST00000474088 ABLIM1O14639 778 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 SLC16A4O15374 487 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 KCNE1P15382 129 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 C8orf34Q49A92 452 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 MPZL3Q6UWV2 235 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 MTSS1LQ765P7 747 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 SNX27Q96L92 541 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 SIT1Q9Y3P8 196 aa27.16■■□□□ 1.94
PKD1-211ENST00000474088 PODXLO00592 558 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 GUCY2CP25092 1073 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 PABPC1LQ4VXU2 614 aaKnown RBP27.15■■□□□ 1.94
PKD1-211ENST00000474088 RILPL1Q5EBL4 403 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 ZNF461Q8TAF7 563 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 KCNH3Q9ULD8 1083 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 KIF3AQ9Y496 699 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 DOCK6Q96HP0 2047 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 TRIP11Q15643 1979 aa27.15■■□□□ 1.94
PKD1-211ENST00000474088 DCNP07585 359 aaKnown RBP27.14■■□□□ 1.94
PKD1-211ENST00000474088 STARD6P59095 220 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 ZRSR1Q15695 479 aaKnown RBP27.14■■□□□ 1.94
PKD1-211ENST00000474088 SPECC1Q5M775 1068 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 HYIQ5T013 277 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 MCTP1Q6DN14 999 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 SLC8B1Q6J4K2 584 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 ZBTB45Q96K62 511 aaPredicted RBP27.14■■□□□ 1.94
PKD1-211ENST00000474088 DLGAP2Q9P1A6 1054 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 CNTN3Q9P232 1028 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 KCNG1Q9UIX4 513 aa27.14■■□□□ 1.94
PKD1-211ENST00000474088 RPL9P32969 192 aaKnown RBP27.13■■□□□ 1.93
PKD1-211ENST00000474088 ATP2C1P98194 919 aaPredicted RBP27.13■■□□□ 1.93
PKD1-211ENST00000474088 VARS2Q5ST30 1063 aaKnown RBP27.13■■□□□ 1.93
PKD1-211ENST00000474088 NPAS3Q8IXF0 933 aa27.13■■□□□ 1.93
PKD1-211ENST00000474088 KCTD17Q8N5Z5 321 aa27.13■■□□□ 1.93
PKD1-211ENST00000474088 SPIRE2Q8WWL2 714 aa27.13■■□□□ 1.93
PKD1-211ENST00000474088 SHDQ96IW2 340 aa27.13■■□□□ 1.93
PKD1-211ENST00000474088 PNMA5Q96PV4 448 aa27.13■■□□□ 1.93
PKD1-211ENST00000474088 SYN3O14994 580 aa27.12■■□□□ 1.93
PKD1-211ENST00000474088 MEFVO15553 781 aaPredicted RBP27.12■■□□□ 1.93
PKD1-211ENST00000474088 TBC1D4O60343 1298 aa27.12■■□□□ 1.93
PKD1-211ENST00000474088 TOM1L1O75674 476 aa27.12■■□□□ 1.93
PKD1-211ENST00000474088 ABLIM3O94929 683 aa27.12■■□□□ 1.93
PKD1-211ENST00000474088 HARSP12081 509 aaKnown RBP27.12■■□□□ 1.93
PKD1-211ENST00000474088 PLS3P13797 630 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms