RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 TRAPPC3O43617 180 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 HIP1RO75146 1068 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 HOXA9P31269 272 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 GRM5P41594 1212 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
COL16A1-210ENST00000474000 OSTNP61366 133 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 XKR4Q5GH76 650 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 PARM1Q6UWI2 310 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 RSPO2Q6UXX9 243 aaPredicted RBP13.2□□□□□ -0.3
COL16A1-210ENST00000474000 DTHD1Q6ZMT9 781 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 C1orf186Q6ZWK4 172 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 CEP120Q8N960 986 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 SLC7A14Q8TBB6 771 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 FGF13Q92913 245 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 CCDC94Q9BW85 323 aaPredicted RBP13.2□□□□□ -0.3
COL16A1-210ENST00000474000 CDT1Q9H211 546 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 TMEM134Q9H6X4 195 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 KMT5AQ9NQR1 393 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 SLC2A4RGQ9NR83 387 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 MTRRQ9UBK8 725 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 RBM19Q9Y4C8 960 aaKnown RBP13.2□□□□□ -0.3
COL16A1-210ENST00000474000 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 R4GN57 208 aa13.2□□□□□ -0.3
COL16A1-210ENST00000474000 SFI1A8K8P3 1242 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 I3L4J1 428 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 XYLBO75191 536 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 RFX1P22670 979 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 TKTP29401 623 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 PRPHP41219 470 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 BRCC3P46736 316 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 GPC5P78333 572 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 SOX4Q06945 474 aaPredicted RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 DMP1Q13316 513 aaPredicted RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 ANKS3Q6ZW76 656 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 TAS1R3Q7RTX0 852 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 ITFG1Q8TB96 612 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 FGF14Q92915 247 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 DRC1Q96MC2 740 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 TCHPQ9BT92 498 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 MMTAG2Q9BU76 263 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 RUSC1Q9BVN2 902 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 C17orf75Q9HAS0 396 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 TOPORSQ9NS56 1045 aaPredicted RBP13.19□□□□□ -0.3
COL16A1-210ENST00000474000 ARHGAP28Q9P2N2 729 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 BACE2Q9Y5Z0 518 aa13.19□□□□□ -0.3
COL16A1-210ENST00000474000 SLC16A4O15374 487 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 LMNAP02545 664 aaKnown RBP13.18□□□□□ -0.3
COL16A1-210ENST00000474000 DCNP07585 359 aaKnown RBP13.18□□□□□ -0.3
COL16A1-210ENST00000474000 MCF2P10911 925 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 MAPK7Q13164 816 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
COL16A1-210ENST00000474000 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 RTL10Q7L3V2 364 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 RMDN1Q96DB5 314 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 SLC38A7Q9NVC3 462 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 HCFC1R1Q9NWW0 138 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 DNMT3BQ9UBC3 853 aaKnown RBP13.18□□□□□ -0.3
COL16A1-210ENST00000474000 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 GVINP1Q7Z2Y8 2422 aa13.18□□□□□ -0.3
COL16A1-210ENST00000474000 PHLPP2Q6ZVD8 1323 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 PODXLO00592 558 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 ABLIM1O14639 778 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 POU2F2P09086 479 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 KCNE1P15382 129 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 PROZP22891 400 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 C8orf34Q49A92 452 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
COL16A1-210ENST00000474000 MCTP1Q6DN14 999 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 KIAA2013Q8IYS2 634 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 ZNF461Q8TAF7 563 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 ZBTB45Q96K62 511 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-210ENST00000474000 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
COL16A1-210ENST00000474000 WDR87Q6ZQQ6 2873 aa13.16□□□□□ -0.3
COL16A1-210ENST00000474000 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-210ENST00000474000 ABLIM3O94929 683 aa13.16□□□□□ -0.3
COL16A1-210ENST00000474000 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
COL16A1-210ENST00000474000 RPL9P32969 192 aaKnown RBP13.16□□□□□ -0.3
COL16A1-210ENST00000474000 STARD6P59095 220 aa13.16□□□□□ -0.3
COL16A1-210ENST00000474000 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
COL16A1-210ENST00000474000 STRN3Q13033 797 aa13.16□□□□□ -0.3
COL16A1-210ENST00000474000 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms