RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KIAA1586Q9HCI6 787 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 LMCD1Q9NZU5 365 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 CACNG4Q9UBN1 327 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 MAN1B1Q9UKM7 699 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 MYO9BQ13459 2157 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 SZT2Q5T011 3432 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 MEFVO15553 781 aaPredicted RBP13.48□□□□□ -0.25
DDX56-209ENST00000473924 EXOC3O60645 756 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 TADA2AO75478 443 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 MBD3O95983 291 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 CA8P35219 290 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 PRCPP42785 496 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 BMS1Q14692 1282 aaKnown RBP13.48□□□□□ -0.25
DDX56-209ENST00000473924 TMEM132DQ14C87 1099 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 NAB2Q15742 525 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 JADE1Q6IE81 842 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 TMEM173Q86WV6 379 aaPredicted RBP13.48□□□□□ -0.25
DDX56-209ENST00000473924 BRSK2Q8IWQ3 736 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 RDH13Q8NBN7 331 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 ZSWIM2Q8NEG5 633 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 C18orf25Q96B23 403 aaPredicted RBP13.48□□□□□ -0.25
DDX56-209ENST00000473924 TSPAN18Q96SJ8 248 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 PAAF1Q9BRP4 392 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 ENTPD7Q9NQZ7 604 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 KIAA1468Q9P260 1216 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 STK39Q9UEW8 545 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 UBQLN1Q9UMX0 589 aaKnown RBP13.48□□□□□ -0.25
DDX56-209ENST00000473924 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 MTCH2Q9Y6C9 303 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 TRIP11Q15643 1979 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 PLXNA4Q9HCM2 1894 aa13.48□□□□□ -0.25
DDX56-209ENST00000473924 B3GAT3O94766 335 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 ADRB2P07550 413 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 POU3F3P20264 500 aaPredicted RBP13.47□□□□□ -0.25
DDX56-209ENST00000473924 DNAJB1P25685 340 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 MCM4P33991 863 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 PPP1R2P41236 205 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 CLCNKBP51801 687 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 SOX4Q06945 474 aaPredicted RBP13.47□□□□□ -0.25
DDX56-209ENST00000473924 SNRNP35Q16560 246 aaKnown RBP13.47□□□□□ -0.25
DDX56-209ENST00000473924 TMC7Q7Z402 723 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 DDX53Q86TM3 631 aaKnown RBP13.47□□□□□ -0.25
DDX56-209ENST00000473924 CBWD2Q8IUF1 395 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 C12orf56Q8IXR9 622 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 VPS52Q8N1B4 723 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 BEST2Q8NFU1 509 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 GPT2Q8TD30 523 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 BCL7CQ8WUZ0 217 aaPredicted RBP13.47□□□□□ -0.25
DDX56-209ENST00000473924 PPM1EQ8WY54 764 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
DDX56-209ENST00000473924 TSG101Q99816 390 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 TCF25Q9BQ70 676 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 TUBGCP4Q9UGJ1 667 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 TRAF3IP3Q9Y228 551 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 STXBP5LQ9Y2K9 1186 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 DERAQ9Y315 318 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.47□□□□□ -0.25
DDX56-209ENST00000473924 CHD7Q9P2D1 2997 aa13.47□□□□□ -0.25
DDX56-209ENST00000473924 F8W810 466 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 PODXLO00592 558 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 PSMA7O14818 248 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 KIF4AO95239 1232 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 NR3C1P04150 777 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 NFICP08651 508 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 CYP3A5P20815 502 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 RPL9P32969 192 aaKnown RBP13.46□□□□□ -0.25
DDX56-209ENST00000473924 ERVFC1P60507 584 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 MORC3Q14149 939 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 SURF1Q15526 300 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 CCDC85BQ15834 202 aaPredicted RBP13.46□□□□□ -0.25
DDX56-209ENST00000473924 UPP1Q16831 310 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 COBLL1Q53SF7 1204 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 CEP135Q66GS9 1140 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 PDE12Q6L8Q7 609 aaKnown RBP13.46□□□□□ -0.25
DDX56-209ENST00000473924 DCLRE1AQ6PJP8 1040 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 NT5DC4Q86YG4 428 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 SLC9A9Q8IVB4 645 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 ADSSL1Q8N142 457 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 TRIML1Q8N9V2 468 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 PPP2R3CQ969Q6 453 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 MARCH5Q9NX47 278 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 FRMD4BQ9Y2L6 1034 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 C2CD2Q9Y426 696 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 NUB1Q9Y5A7 615 aa13.46□□□□□ -0.25
DDX56-209ENST00000473924 SF3B1O75533 1304 aaKnown RBP eCLIP13.45□□□□□ -0.26
DDX56-209ENST00000473924 PDCD11Q14690 1871 aaKnown RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 TMEM191BP0C7N4 346 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 NR2F2P24468 414 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 RPL13P26373 211 aaKnown RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 IRS1P35568 1242 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 TFAMQ00059 246 aaKnown RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 CAMK1Q14012 370 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 MYBPC2Q14324 1141 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 ZBTB6Q15916 424 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms