RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 C3orf58Q8NDZ4 430 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 SLC7A14Q8TBB6 771 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 TOPORSQ9NS56 1045 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-217ENST00000473720 IGSF9Q9P2J2 1179 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 ARHGAP28Q9P2N2 729 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 FBXW11Q9UKB1 542 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 CDY1Q9Y6F8 540 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 SCN1AP35498 2009 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 PI15O43692 258 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 ARPP19P56211 112 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 UPP1Q16831 310 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 AXDND1Q5T1B0 1012 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 CWF19L1Q69YN2 538 aaKnown RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 DCLRE1AQ6PJP8 1040 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 MPZL3Q6UWV2 235 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 C18orf25Q96B23 403 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 BICD1Q96G01 975 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 ACAP3Q96P50 834 aa13.09□□□□□ -0.31
SMPD4-217ENST00000473720 KIF26AQ9ULI4 1882 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
SMPD4-217ENST00000473720 COL4A3Q01955 1670 aa13.08□□□□□ -0.31
SMPD4-217ENST00000473720 PODXLO00592 558 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 PLA2G4BP0C869 781 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 LAMP2P13473 410 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 SMTNP53814 917 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 PDXDC1Q6P996 788 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 TMEM130Q8N3G9 435 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 SLC44A3Q8N4M1 653 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 SYT2Q8N9I0 419 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-217ENST00000473720 RASSF8Q8NHQ8 419 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 ING5Q8WYH8 240 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
SMPD4-217ENST00000473720 SNX27Q96L92 541 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 UROC1Q96N76 676 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 ZMAT2Q96NC0 199 aaKnown RBP13.08□□□□□ -0.32
SMPD4-217ENST00000473720 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 HCFC1R1Q9NWW0 138 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.08□□□□□ -0.323e-8■□□□□ 9.5
SMPD4-217ENST00000473720 EPS15L1Q9UBC2 864 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 NUB1Q9Y5A7 615 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 NUMBLQ9Y6R0 609 aa13.08□□□□□ -0.32
SMPD4-217ENST00000473720 TSC2P49815 1807 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 PATJQ8NI35 1801 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 TMEM189-UBE2V1I3L0A0 370 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 XYLBO75191 536 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 MCF2P10911 925 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 PLS3P13797 630 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 NPR3P17342 541 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 FGFR3P22607 806 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 CLCN5P51795 746 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 SPAG1Q07617 926 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 NOLC1Q14978 699 aaKnown RBP eCLIP13.07□□□□□ -0.323e-9■□□□□ 10.1
SMPD4-217ENST00000473720 HYIQ5T013 277 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 CD300LGQ6UXG3 332 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 RSPO2Q6UXX9 243 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-217ENST00000473720 GPR152Q8TDT2 470 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 CALML4Q96GE6 196 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 TIPINQ9BVW5 301 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 RHOBTB2Q9BYZ6 727 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 SLC38A7Q9NVC3 462 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 MTRRQ9UBK8 725 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-217ENST00000473720 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
SMPD4-217ENST00000473720 FANCMQ8IYD8 2048 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-217ENST00000473720 KRBA1A5PL33 1030 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-217ENST00000473720 GFRA3O60609 400 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 C1RP00736 705 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMPD4-217ENST00000473720 SRFP11831 508 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 AOC1P19801 751 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 PROZP22891 400 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 ELF1P32519 619 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 MCM4P33991 863 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 UBA7P41226 1012 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 RAB33AQ14088 237 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
SMPD4-217ENST00000473720 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 GPBP1Q86WP2 473 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 TMEM161BQ8NDZ6 487 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 ITFG1Q8TB96 612 aa13.06□□□□□ -0.32
SMPD4-217ENST00000473720 RPP25Q9BUL9 199 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms