RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CCSAPQ6IQ19 270 aaPredicted RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 LBX2Q6XYB7 198 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 CIR1Q86X95 450 aaPredicted RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 KIF18BQ86Y91 864 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 CISD2Q8N5K1 135 aaKnown RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 JPH3Q8WXH2 748 aaPredicted RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 RAPGEF4Q8WZA2 1011 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 DPF2Q92785 391 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 ZKSCAN4Q969J2 545 aaPredicted RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 FCRL3Q96P31 734 aaPredicted RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 CRAMP1Q96RY5 1269 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 RPS6KC1Q96S38 1066 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 MPHOSPH6Q99547 160 aaKnown RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 VPS33BQ9H267 617 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 IKZF4Q9H2S9 585 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 PCIF1Q9H4Z3 704 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 BCAS3Q9H6U6 928 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 ASH1LQ9NR48 2969 aaKnown RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 CLDND1Q9NY35 253 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 PPP4R1LQ9P1A2 415 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 KCNG1Q9UIX4 513 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 NOC2LQ9Y3T9 749 aaKnown RBP2.91□□□□□ -1.94
CALD1-216ENST00000473714 TESMINQ9Y4I5 508 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 COMMD10Q9Y6G5 202 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 FAM186AA6NE01 2351 aa2.91□□□□□ -1.94
CALD1-216ENST00000473714 TONSLQ96HA7 1378 aa2.9□□□□□ -1.94
CALD1-216ENST00000473714 USP9XQ93008 2570 aaPredicted RBP2.9□□□□□ -1.94
CALD1-216ENST00000473714 ZFHX2Q9C0A1 2572 aaPredicted RBP2.9□□□□□ -1.94
CALD1-216ENST00000473714 KLRG2A4D1S0 409 aaPredicted RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 GOLGA8AA7E2F4 631 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 GOLGA8BA8MQT2 603 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 CBX4O00257 560 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 ERC2O15083 957 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 NPHS1O60500 1241 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 IL33O95760 270 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 ZBTB48P10074 688 aaPredicted RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 GNAT1P11488 350 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 NPR1P16066 1061 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 GRK2P25098 689 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 TACR1P25103 407 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 RPL13P26373 211 aaKnown RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 ALDH1B1P30837 517 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 GRK3P35626 688 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 GNALP38405 381 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 LSSP48449 732 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 GTF2A2P52657 109 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 SCAND1P57086 179 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 SESN3P58005 492 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 RHBDL3P58872 404 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 RPL11P62913 178 aaKnown RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 TFF2Q03403 129 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 CACNB2Q08289 660 aaPredicted RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 SPIRE1Q08AE8 756 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 LSAMPQ13449 338 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 PRKG1Q13976 671 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 HLTFQ14527 1009 aaKnown RBP eCLIP2.9□□□□□ -1.95
CALD1-216ENST00000473714 TNIP1Q15025 636 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 SHHQ15465 462 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 MAP9Q49MG5 647 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 ARHGAP29Q52LW3 1261 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 MCTP2Q6DN12 878 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 ASCL5Q7RTU5 278 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 PLEKHH3Q7Z736 793 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 CPNE8Q86YQ8 564 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 CHST14Q8NCH0 376 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 DNERQ8NFT8 737 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 PCDH19Q8TAB3 1148 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 FRS2Q8WU20 508 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 CHTF18Q8WVB6 975 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 CPA5Q8WXQ8 436 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 ANKS1AQ92625 1134 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 PMM1Q92871 262 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 COPS5Q92905 334 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 TRMT2BQ96GJ1 504 aaKnown RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 TMEM169Q96HH4 297 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 LRGUKQ96M69 825 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 HNRNPABQ99729 332 aaKnown RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 IPPKQ9H8X2 491 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 RXFP1Q9HBX9 757 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 TOMM22Q9NS69 142 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 SPTLC3Q9NUV7 552 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 ANKRD6Q9Y2G4 727 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 COA3Q9Y2R0 106 aaPredicted RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 TIMM13Q9Y5L4 95 aaPredicted RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 LRRC37A2A6NM11 1700 aa2.9□□□□□ -1.95
CALD1-216ENST00000473714 SOS1Q07889 1333 aaPredicted RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 RIF1Q5UIP0 2472 aaKnown RBP2.9□□□□□ -1.95
CALD1-216ENST00000473714 SCN7AQ01118 1682 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 ZNF292O60281 2723 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 SLC12A8A0AV02 714 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 PRR23AA6NEV1 266 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 VSTM5A8MXK1 200 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 ARVCFO00192 962 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 GABRDO14764 452 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 MSCO60682 206 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 EIF3JO75822 258 aaKnown RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 DGKIO75912 1065 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 PRKD3O94806 890 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 IFIT2P09913 472 aaKnown RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 PF4V1P10720 104 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms