RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 LRRC45Q96CN5 670 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 KLHL29Q96CT2 875 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 PARVBQ9HBI1 364 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 NDUFA13Q9P0J0 144 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 SAP30BPQ9UHR5 308 aaKnown RBP5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 PPP1R9AQ9ULJ8 1098 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 SSX2IPQ9Y2D8 614 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 FAM32AQ9Y421 112 aaKnown RBP5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 ATP7BP35670 1465 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 LTBP3Q9NS15 1303 aa5.51□□□□□ -1.53
TMEM39A-206ENST00000473684 KANSL1LA0AUZ9 987 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 F8W031 263 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 GCOM1H8Y6P7 765 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MFAP3LO75121 409 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 STAM2O75886 525 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 BBOX1O75936 387 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MYZAPP0CAP1 466 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 SARSP49591 514 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 PDE6CP51160 858 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 RAD23BP54727 409 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ZBTB17Q13105 803 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 CYLC2Q14093 348 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 EIF4A2Q14240 407 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 TRAPPC3LQ5T215 181 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MRM1Q6IN84 353 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 IFT20Q8IY31 132 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 BRF1Q92994 677 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ABTB1Q969K4 478 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 CCDC43Q96MW1 224 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 SLC9A7Q96T83 725 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 NSRP1Q9H0G5 558 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 CLK4Q9HAZ1 481 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 RAD18Q9NS91 495 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 SAMSN1Q9NSI8 373 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 FAIMQ9NVQ4 179 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 CRIM1Q9NZV1 1036 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 SAMD15Q9P1V8 674 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 BTBD7Q9P203 1132 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 TTC7AQ9ULT0 858 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 NSD3Q9BZ95 1437 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MEGF11A6BM72 1044 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 EIF4E1BA6NMX2 242 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 TTC34A8MYJ7 566 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 CHURC1-FNTBB4DL54 471 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 SPECC1L-ADORA2AF8WAN1 911 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 STRNO43815 780 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ASMTLO95671 621 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ZNF18P17022 549 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 POLR2EP19388 210 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 NTF4P34130 210 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 OCRLQ01968 901 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 GUCY2DQ02846 1103 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 DUOXA2Q1HG44 320 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MUM1Q2TAK8 710 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 GALNTL6Q49A17 601 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ARSHQ5FYA8 562 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 FKBP15Q5T1M5 1219 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 UBE2Q1Q7Z7E8 422 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 KCNG4Q8TDN1 519 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 PRCCQ92733 491 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 SLC7A5P2Q9GIP4 190 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ECT2Q9H8V3 914 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 CYP39A1Q9NYL5 469 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ZMAT5Q9UDW3 170 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 NR2E3Q9Y5X4 410 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 PIK3C2AO00443 1686 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 LY75O60449 1722 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 A0A0A0MRY4 1105 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MATN2O00339 956 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 NVLO15381 856 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 CBFA2T3O75081 653 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 WISP1O95388 367 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 EIF2S1P05198 315 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 GSTT2P0CG29 244 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 GSTT2BP0CG30 244 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 TPBGLP0DKB5 382 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 TMOD1P28289 359 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 HPDP32754 393 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 NDUFA8P51970 172 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ITGA9Q13797 1035 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 NR1I3Q14994 352 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 PARP6Q2NL67 630 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 LIN52Q52LA3 116 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 PLEKHG4Q58EX7 1191 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ZNF362Q5T0B9 420 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ZNF804AQ7Z570 1209 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MCATQ8IVS2 390 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 EIF1ADQ8N9N8 165 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 GATA6Q92908 595 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 FAM129AQ9BZQ8 928 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 RPAP3Q9H6T3 665 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 PLCB1Q9NQ66 1216 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 JADE2Q9NQC1 790 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 FAM114A2Q9NRY5 505 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ATAD3AQ9NVI7 634 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 MKS1Q9NXB0 559 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 ARHGEF38Q9NXL2 777 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 EURLQ9NYK6 297 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 PTTG2Q9NZH5 202 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 C6orf203Q9P0P8 240 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms