RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 MAPK13O15264 365 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 ALDH2P05091 517 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 GALTP07902 379 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 CYP3A5P20815 502 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 NR2F2P24468 414 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 ZBTB6Q15916 424 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 CAVIN1Q6NZI2 390 aaKnown RBP20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 CBWD2Q8IUF1 395 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 ZC3H3Q8IXZ2 948 aaKnown RBP20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 NOC3LQ8WTT2 800 aaKnown RBP20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 KIF12Q96FN5 646 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 DACH1Q9UI36 760 aa20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 UBQLN1Q9UMX0 589 aaKnown RBP20.61■□□□□ 0.89
CTDSP1-207ENST00000473420 H3BNC9 293 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 SLC11A1P49279 550 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 PAK1Q13153 545 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 TMEM132DQ14C87 1099 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 ANKRD40Q6AI12 368 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 JADE1Q6IE81 842 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 SLC39A11Q8N1S5 342 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 NELFBQ8WX92 580 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 ARNTL2Q8WYA1 636 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 FAM212AQ96EL1 285 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 MFSD14AQ96MC6 490 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 SPG21Q9NZD8 308 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 MTUS1Q9ULD2 1270 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 FRMD4BQ9Y2L6 1034 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 FAN1Q9Y2M0 1017 aa20.6■□□□□ 0.89
CTDSP1-207ENST00000473420 NRP1O14786 923 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 PMS1P54277 932 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 FKBP3Q00688 224 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 PLCB3Q01970 1234 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 CYP24A1Q07973 514 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 ADAM9Q13443 819 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 PSMD6Q15008 389 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 CT47A1Q5JQC4 288 aaPredicted RBP20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 KLHL10Q6JEL2 608 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 DDX27Q96GQ7 796 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 MKNK1Q9BUB5 465 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 CTNND2Q9UQB3 1225 aa20.59■□□□□ 0.89
CTDSP1-207ENST00000473420 TRIM49BA6NDI0 452 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 CETN3O15182 167 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 LETM1O95202 739 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 NFICP08651 508 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 LRPAP1P30533 357 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 RPL9P32969 192 aaKnown RBP20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 PBX3P40426 434 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 OR1G1P47890 313 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 UBE3AQ05086 875 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 SOX4Q06945 474 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 NFKBIBQ15653 356 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 DPCR1Q3MIW9 517 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 SPATA1Q5VX52 437 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 CEP135Q66GS9 1140 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 TTI2Q6NXR4 508 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 SASS6Q6UVJ0 657 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 KLHL23Q8NBE8 558 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 RDH13Q8NBN7 331 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 BEST2Q8NFU1 509 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 COLEC11Q9BWP8 271 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 CERS4Q9HA82 394 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 PDE11AQ9HCR9 933 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 STK39Q9UEW8 545 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 RWDD2AQ9UIY3 292 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 LZTS1Q9Y250 596 aa20.58■□□□□ 0.89
CTDSP1-207ENST00000473420 CASTOR2A6NHX0 329 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 TMEM189-UBE2V1I3L0A0 370 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 SLC16A3O15427 465 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 FGF18O76093 207 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 ITGB1P05556 798 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 PSMC2P35998 433 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 CASP4P49662 377 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 WNT7BP56706 349 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 ENPEPQ07075 957 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 SPAG1Q07617 926 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 GPM6BQ13491 265 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 UPP1Q16831 310 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 WDR49Q8IV35 697 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 EFCAB13Q8IY85 973 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 CACTINQ8WUQ7 758 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 C18orf25Q96B23 403 aaPredicted RBP20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 TMEM169Q96HH4 297 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 IGSF21Q96ID5 467 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 CEP63Q96MT8 703 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 LMAN2LQ9H0V9 348 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 GOLGA2P5Q9HBQ8 144 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 TUBGCP4Q9UGJ1 667 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 ATG2AQ2TAZ0 1938 aa20.57■□□□□ 0.88
CTDSP1-207ENST00000473420 CHD7Q9P2D1 2997 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 EPOPA6NHQ4 379 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 NT5C1B-RDH14C9J2C7 533 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 AKAP3O75969 853 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 ERCC5P28715 1186 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 MCCD1P59942 119 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 KRT17Q04695 432 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 GRIN2CQ14957 1233 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 DCLRE1AQ6PJP8 1040 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 INTS8Q75QN2 995 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 USP37Q86T82 979 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 TMC2Q8TDI7 906 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms