RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 UBE3AQ05086 875 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 ZMAT2Q96NC0 199 aaKnown RBP21.69■■□□□ 1.06
SF1-213ENST00000472725 MKNK1Q9BUB5 465 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 COLEC11Q9BWP8 271 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 PLAGL2Q9UPG8 496 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 LZTS1Q9Y250 596 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 FAN1Q9Y2M0 1017 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 GOLGA8IPA6NC78 632 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 GOLGA8JA6NMD2 632 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 CD44P16070 742 aaKnown RBP21.68■■□□□ 1.06
SF1-213ENST00000472725 FKBP3Q00688 224 aaKnown RBP21.68■■□□□ 1.06
SF1-213ENST00000472725 KRT17Q04695 432 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 ADAM9Q13443 819 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 USP37Q86T82 979 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 CBWD2Q8IUF1 395 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 SLC39A11Q8N1S5 342 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 ARNTL2Q8WYA1 636 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 KIF12Q96FN5 646 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 MFSD14AQ96MC6 490 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 LMAN2LQ9H0V9 348 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 TMEM63CQ9P1W3 806 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 DNAJB4Q9UDY4 337 aa21.68■■□□□ 1.06
SF1-213ENST00000472725 TMEM189-UBE2V1I3L0A0 370 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 NRP1O14786 923 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 CETN3O15182 167 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 PAX3P23760 479 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 SLC11A1P49279 550 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 PAK1Q13153 545 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 TMEM132DQ14C87 1099 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 PSMD6Q15008 389 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 GLRA4Q5JXX5 417 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 SASS6Q6UVJ0 657 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 ZC3H3Q8IXZ2 948 aaKnown RBP21.67■■□□□ 1.06
SF1-213ENST00000472725 ZSWIM2Q8NEG5 633 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 BEST2Q8NFU1 509 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 CACTINQ8WUQ7 758 aaKnown RBP21.67■■□□□ 1.06
SF1-213ENST00000472725 FAM212AQ96EL1 285 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 CXCL16Q9H2A7 254 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 HCSTQ9UBK5 93 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 LAMA3Q16787 3333 aa21.67■■□□□ 1.06
SF1-213ENST00000472725 FGF18O76093 207 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 LRPAP1P30533 357 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 PSMC2P35998 433 aaKnown RBP21.66■■□□□ 1.06
SF1-213ENST00000472725 OR1G1P47890 313 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 CYP24A1Q07973 514 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 GPM6BQ13491 265 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 SPATA1Q5VX52 437 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 ANKRD40Q6AI12 368 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 JADE1Q6IE81 842 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 KLHL23Q8NBE8 558 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 NOC3LQ8WTT2 800 aaKnown RBP21.66■■□□□ 1.06
SF1-213ENST00000472725 NELFBQ8WX92 580 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 TMEM169Q96HH4 297 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 IGSF21Q96ID5 467 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 LMCD1Q9NZU5 365 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 PUF60Q9UHX1 559 aaKnown RBP21.66■■□□□ 1.06
SF1-213ENST00000472725 RWDD2AQ9UIY3 292 aa21.66■■□□□ 1.06
SF1-213ENST00000472725 B4GALT3O60512 393 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 ERCC5P28715 1186 aaPredicted RBP21.65■■□□□ 1.06
SF1-213ENST00000472725 AP3M2P53677 418 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 MCCD1P59942 119 aaPredicted RBP21.65■■□□□ 1.06
SF1-213ENST00000472725 UPP1Q16831 310 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 KLHL10Q6JEL2 608 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 TTI2Q6NXR4 508 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 CAVIN1Q6NZI2 390 aaKnown RBP21.65■■□□□ 1.06
SF1-213ENST00000472725 DCLRE1AQ6PJP8 1040 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 INTS8Q75QN2 995 aaKnown RBP21.65■■□□□ 1.06
SF1-213ENST00000472725 WDR49Q8IV35 697 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 RDH13Q8NBN7 331 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 TMC2Q8TDI7 906 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 CEP63Q96MT8 703 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 FNBP1Q96RU3 617 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 MTUS1Q9ULD2 1270 aa21.65■■□□□ 1.06
SF1-213ENST00000472725 LAMA2P24043 3122 aaKnown RBP21.64■■□□□ 1.05
SF1-213ENST00000472725 SLC16A3O15427 465 aaKnown RBP21.64■■□□□ 1.05
SF1-213ENST00000472725 FGFR1OPO95684 399 aaKnown RBP21.64■■□□□ 1.05
SF1-213ENST00000472725 POU3F3P20264 500 aaPredicted RBP21.64■■□□□ 1.05
SF1-213ENST00000472725 GRIN2CQ14957 1233 aa21.64■■□□□ 1.05
SF1-213ENST00000472725 CEP135Q66GS9 1140 aa21.64■■□□□ 1.05
SF1-213ENST00000472725 PDE12Q6L8Q7 609 aaKnown RBP21.64■■□□□ 1.05
SF1-213ENST00000472725 SPRED2Q7Z698 418 aa21.64■■□□□ 1.05
SF1-213ENST00000472725 DDX53Q86TM3 631 aaKnown RBP21.64■■□□□ 1.05
SF1-213ENST00000472725 CERS4Q9HA82 394 aa21.64■■□□□ 1.05
SF1-213ENST00000472725 PDE11AQ9HCR9 933 aa21.64■■□□□ 1.05
SF1-213ENST00000472725 ANO10Q9NW15 660 aa21.64■■□□□ 1.05
SF1-213ENST00000472725 CTNND2Q9UQB3 1225 aa21.64■■□□□ 1.05
SF1-213ENST00000472725 CASTOR2A6NHX0 329 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 ITGB1P05556 798 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 NFICP08651 508 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 EPB41P11171 864 aaKnown RBP21.63■■□□□ 1.05
SF1-213ENST00000472725 PMS1P54277 932 aaKnown RBP21.63■■□□□ 1.05
SF1-213ENST00000472725 CLDN10P78369 228 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 SOX4Q06945 474 aaPredicted RBP21.63■■□□□ 1.05
SF1-213ENST00000472725 ELAVL2Q12926 359 aaKnown RBP21.63■■□□□ 1.05
SF1-213ENST00000472725 BMS1Q14692 1282 aaKnown RBP21.63■■□□□ 1.05
SF1-213ENST00000472725 PTPROQ16827 1216 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 DUOXA2Q1HG44 320 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 DPCR1Q3MIW9 517 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 FILIP1Q7Z7B0 1213 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 DEFB123Q8N688 67 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms