RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 NSUN7Q8NE18 718 aaKnown RBP11.13□□□□□ -0.63
SCAMP3-205ENST00000472397 DDX27Q96GQ7 796 aaKnown RBP11.13□□□□□ -0.63
SCAMP3-205ENST00000472397 SHDQ96IW2 340 aa11.13□□□□□ -0.63
SCAMP3-205ENST00000472397 USP18Q9UMW8 372 aa11.13□□□□□ -0.63
SCAMP3-205ENST00000472397 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
SCAMP3-205ENST00000472397 CCDC169A6NNP5 214 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 KRT37O76014 449 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 SEC24AO95486 1093 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 FGFR3P22607 806 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 VIPR2P41587 438 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 CREMQ03060 361 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 POU5F1BQ06416 359 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 SPAG1Q07617 926 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 RAB33AQ14088 237 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 TRIM29Q14134 588 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 MTSS1LQ765P7 747 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 WASF1Q92558 559 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 C18orf25Q96B23 403 aaPredicted RBP11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 ZSWIM3Q96MP5 696 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 CNTNAP3BQ96NU0 1288 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 RHOBTB2Q9BYZ6 727 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 CNTNAP3Q9BZ76 1288 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 CCDC113Q9H0I3 377 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 CYP4F11Q9HBI6 524 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 MTRRQ9UBK8 725 aa11.12□□□□□ -0.63
SCAMP3-205ENST00000472397 NOTCH4Q99466 2003 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 ACKR2O00590 384 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 PRRG1O14668 218 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 MYL4P12829 197 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 CYP11B2P19099 503 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 CCT6AP40227 531 aaKnown RBP11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 CCR2P41597 374 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 PEX3P56589 373 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 ROR1Q01973 937 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 DMWDQ09019 674 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 MTAPQ13126 283 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 SRSF5Q13243 272 aaKnown RBP11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 PCBP1Q15365 356 aaKnown RBP eCLIP11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 ZRSR1Q15695 479 aaKnown RBP11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 FAM78AQ5JUQ0 283 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 ATF7IP2Q5U623 682 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 MCPH1Q8NEM0 835 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 ATRIPQ8WXE1 791 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 ZBTB45Q96K62 511 aaPredicted RBP11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 NFKBIZQ9BYH8 718 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 C2orf40Q9H1Z8 148 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 SEMA4AQ9H3S1 761 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 PARD6AQ9NPB6 346 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 MIA3Q5JRA6 1907 aa11.11□□□□□ -0.63
SCAMP3-205ENST00000472397 SMIM28A0A1B0GU29 152 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 WDR27A2RRH5 827 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 E9PMD0 336 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 PODXLO00592 558 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 LRG1P02750 347 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 OR4Q2P0C623 313 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 CDC25AP30304 524 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 GDI1P31150 447 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 ELF1P32519 619 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 ATXN1P54253 815 aaKnown RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 PRKCQQ04759 706 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 RAD51AP2Q09MP3 1159 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 SPEM2Q0P670 501 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 UPP1Q16831 310 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 ZMAT2Q96NC0 199 aaKnown RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 PGLYRP2Q96PD5 576 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 PPP1R10Q96QC0 940 aaKnown RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 PLIN2Q99541 437 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 DDX23Q9BUQ8 820 aaKnown RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 TARS2Q9BW92 718 aaKnown RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 CDT1Q9H211 546 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 BHMT2Q9H2M3 363 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 BRD9Q9H8M2 597 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 TUFT1Q9NNX1 390 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 SMG5Q9UPR3 1016 aaKnown RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 KIAA1024Q9UPX6 916 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 TIMM13Q9Y5L4 95 aaPredicted RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 ZFP37Q9Y6Q3 630 aaPredicted RBP11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 ZNF292O60281 2723 aa11.1□□□□□ -0.63
SCAMP3-205ENST00000472397 NCANO14594 1321 aa11.09□□□□□ -0.63
SCAMP3-205ENST00000472397 OTOGLQ3ZCN5 2332 aa11.09□□□□□ -0.63
SCAMP3-205ENST00000472397 NCOR2Q9Y618 2525 aa11.09□□□□□ -0.63
SCAMP3-205ENST00000472397 DMXL1Q9Y485 3027 aa11.09□□□□□ -0.63
SCAMP3-205ENST00000472397 K7ERI5 159 aa11.09□□□□□ -0.63
SCAMP3-205ENST00000472397 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
SCAMP3-205ENST00000472397 MEFVO15553 781 aaPredicted RBP11.09□□□□□ -0.63
SCAMP3-205ENST00000472397 PAPLNO95428 1278 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms