RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 SLC27A1Q6PCB7 646 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 SYT10Q6XYQ8 523 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 CATSPER4Q7RTX7 472 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 ZNF571Q7Z3V5 609 aaPredicted RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 RNF180Q86T96 592 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 RPAINQ86UA6 219 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 RSPH3Q86UC2 560 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 SERINC5Q86VE9 423 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 VPS36Q86VN1 386 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 CDR2LQ86X02 465 aaPredicted RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 GPIHBP1Q8IV16 184 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 PPM1KQ8N3J5 372 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 OR5B17Q8NGF7 314 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 KIF18AQ8NI77 898 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 OLIG1Q8TAK6 271 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 ATRIPQ8WXE1 791 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 SHC3Q92529 594 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 CPB2Q96IY4 423 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 KREMEN1Q96MU8 473 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 SYT11Q9BT88 431 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 RPF1Q9H9Y2 349 aaKnown RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 NENFQ9UMX5 172 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 PCDHA13Q9Y5I0 950 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 A0A087X0T9 212 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 M0QZ92 97 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 MEFVO15553 781 aaPredicted RBP10.11□□□□□ -0.79
VPS52-216ENST00000471309 PJA2O43164 708 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 ASS1P00966 412 aaKnown RBP10.11□□□□□ -0.79
VPS52-216ENST00000471309 TNNC2P02585 160 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 TMEM191BP0C7N4 346 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 FAM228BP0C875 321 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 PNMA6AP0CW24 399 aaPredicted RBP10.11□□□□□ -0.79
VPS52-216ENST00000471309 CXCL8P10145 99 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 HOXA11P31270 313 aaPredicted RBP10.11□□□□□ -0.79
VPS52-216ENST00000471309 OSTNP61366 133 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 GNG11P61952 73 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 MRPS6P82932 125 aaKnown RBP10.11□□□□□ -0.79
VPS52-216ENST00000471309 KIF5AQ12840 1032 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 NCOA4Q13772 614 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 DUOXA2Q1HG44 320 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 CCDC122Q5T0U0 273 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 GDF6Q6KF10 455 aaPredicted RBP10.11□□□□□ -0.79
VPS52-216ENST00000471309 NT5DC4Q86YG4 428 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 EFCAB13Q8IY85 973 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 FAM71AQ8IYT1 594 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 TMEM40Q8WWA1 233 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 ZNF592Q92610 1267 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 KAT5Q92993 513 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 FAM84AQ96KN4 292 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 CELF4Q9BZC1 486 aaKnown RBP10.11□□□□□ -0.79
VPS52-216ENST00000471309 IMPG2Q9BZV3 1241 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 MTMR12Q9C0I1 747 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 ASB7Q9H672 318 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 CDHR5Q9HBB8 845 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 DNAI1Q9UI46 699 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 GINS2Q9Y248 185 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 TRPV2Q9Y5S1 764 aa10.11□□□□□ -0.79
VPS52-216ENST00000471309 MROH7Q68CQ1 1323 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 RCCD1A6NED2 376 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 FOXN3O00409 490 aaPredicted RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 FANCGO15287 622 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 PHACTR2O75167 634 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 FGFR4P22455 802 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 TBXAS1P24557 533 aaPredicted RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 GRK4P32298 578 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 MAGEA1P43355 309 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 ACLYP53396 1101 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 TERF1P54274 439 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 NOP14P78316 857 aaKnown RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 CUL2Q13617 745 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 NAB2Q15742 525 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 FAM47CQ5HY64 1035 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 TRAPPC11Q7Z392 1133 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 CD302Q8IX05 232 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 TMEM192Q8IY95 271 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 SLC30A5Q8TAD4 765 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 DHX38Q92620 1227 aaKnown RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 TAF4BQ92750 862 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 FAM212AQ96EL1 285 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 ANKRD36BP1Q96IX9 119 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 WDR24Q96S15 920 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 TSEN34Q9BSV6 310 aaKnown RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.1□□□□□ -0.79
VPS52-216ENST00000471309 CCDC94Q9BW85 323 aaPredicted RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 LACRTQ9GZZ8 138 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 PLEKHA5Q9HAU0 1116 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 ADAMTS1Q9UHI8 967 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 C2CD2Q9Y426 696 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 PTCH2Q9Y6C5 1203 aa10.1□□□□□ -0.79
VPS52-216ENST00000471309 PDCD11Q14690 1871 aaKnown RBP10.1□□□□□ -0.79
VPS52-216ENST00000471309 GRIN2DO15399 1336 aa10.09□□□□□ -0.79
VPS52-216ENST00000471309 TRIP12Q14669 1992 aaPredicted RBP10.09□□□□□ -0.79
VPS52-216ENST00000471309 DDX3XO00571 662 aaKnown RBP eCLIP10.09□□□□□ -0.79
VPS52-216ENST00000471309 NPTXRO95502 500 aa10.09□□□□□ -0.79
VPS52-216ENST00000471309 NFICP08651 508 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms