RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 KCNC3Q14003 757 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
ABCF3-208ENST00000471226 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 FUT10Q6P4F1 479 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 CRELD2Q6UXH1 353 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-208ENST00000471226 TAS1R1Q7RTX1 841 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 RBM23Q86U06 439 aaKnown RBP16.53■□□□□ 0.24
ABCF3-208ENST00000471226 SYCP3Q8IZU3 236 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-208ENST00000471226 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 POMGNT1Q8WZA1 660 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 CDCA3Q99618 268 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-208ENST00000471226 GPR62Q9BZJ7 368 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 IGFLR1Q9H665 355 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 RPF1Q9H9Y2 349 aaKnown RBP16.53■□□□□ 0.24
ABCF3-208ENST00000471226 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 CHST7Q9NS84 486 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 CLDND1Q9NY35 253 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 XIRP2A4UGR9 3374 aa16.53■□□□□ 0.24
ABCF3-208ENST00000471226 UBE4BO95155 1302 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 FSD2A1L4K1 749 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 LACTBL1A8MY62 500 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 PER2O15055 1255 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 LINC01565O15544 149 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 TADA2AO75478 443 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 KIF4AO95239 1232 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 PRR29P0C7W0 189 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 ACOT2P49753 483 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 CLCNKBP51801 687 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 MRPS5P82675 430 aaKnown RBP16.52■□□□□ 0.24
ABCF3-208ENST00000471226 PPP2R3AQ06190 1150 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 SNW1Q13573 536 aaKnown RBP16.52■□□□□ 0.24
ABCF3-208ENST00000471226 PTPN14Q15678 1187 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 UPP1Q16831 310 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 KMT5BQ4FZB7 885 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 KIAA0319Q5VV43 1072 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 DCLRE1AQ6PJP8 1040 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 CD300LGQ6UXG3 332 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 CD302Q8IX05 232 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 GPR65Q8IYL9 337 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 SCFD1Q8WVM8 642 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 AUTS2Q8WXX7 1259 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 DDX27Q96GQ7 796 aaKnown RBP16.52■□□□□ 0.24
ABCF3-208ENST00000471226 TSPAN18Q96SJ8 248 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 SLC39A2Q9NP94 309 aa16.52■□□□□ 0.24
ABCF3-208ENST00000471226 PLXNA3P51805 1871 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 GLP2RO95838 553 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 LDHAP00338 332 aaKnown RBP16.51■□□□□ 0.23
ABCF3-208ENST00000471226 CYP3A5P20815 502 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 IGFBP6P24592 240 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-208ENST00000471226 RPL9P32969 192 aaKnown RBP16.51■□□□□ 0.23
ABCF3-208ENST00000471226 DSG1Q02413 1049 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 DLX2Q07687 328 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-208ENST00000471226 DPYDQ12882 1025 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 PSMD2Q13200 908 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 BMT2Q1RMZ1 405 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 AAK1Q2M2I8 961 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 KANK3Q6NY19 840 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 TMEM184AQ6ZMB5 413 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 C18orf25Q96B23 403 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-208ENST00000471226 ASB2Q96Q27 587 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 ASB7Q9H672 318 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
ABCF3-208ENST00000471226 SF3B1O75533 1304 aaKnown RBP eCLIP16.5■□□□□ 0.231e-7■■■■■ 172.3
ABCF3-208ENST00000471226 SCN1AP35498 2009 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-208ENST00000471226 TGFB1I1O43294 461 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
ABCF3-208ENST00000471226 TBX10O75333 385 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 RPN1P04843 607 aaKnown RBP16.5■□□□□ 0.23
ABCF3-208ENST00000471226 URODP06132 367 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 KCNA5P22460 613 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 FAM160A1Q05DH4 1040 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 SPAG1Q07617 926 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 STK4Q13043 487 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 KIAA0895Q8NCT3 520 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 C3orf58Q8NDZ4 430 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 ZSWIM2Q8NEG5 633 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 VN1R2Q8NFZ6 395 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 HASPINQ8TF76 798 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 KIF12Q96FN5 646 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 CBWD1Q9BRT8 395 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 MRPL17Q9NRX2 175 aaKnown RBP16.5■□□□□ 0.23
ABCF3-208ENST00000471226 EXOC1Q9NV70 894 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
ABCF3-208ENST00000471226 UBQLN1Q9UMX0 589 aaKnown RBP16.5■□□□□ 0.23
ABCF3-208ENST00000471226 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-208ENST00000471226 PODXLO00592 558 aa16.49■□□□□ 0.23
ABCF3-208ENST00000471226 KIAA0391O15091 583 aaKnown RBP16.49■□□□□ 0.23
ABCF3-208ENST00000471226 B3GAT3O94766 335 aa16.49■□□□□ 0.23
ABCF3-208ENST00000471226 RHOBTB3O94955 611 aa16.49■□□□□ 0.23
ABCF3-208ENST00000471226 CNPP09543 421 aaKnown RBP16.49■□□□□ 0.23
ABCF3-208ENST00000471226 LRPAP1P30533 357 aa16.49■□□□□ 0.23
ABCF3-208ENST00000471226 GLUD2P49448 558 aa16.49■□□□□ 0.23
ABCF3-208ENST00000471226 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
ABCF3-208ENST00000471226 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
ABCF3-208ENST00000471226 ELAVL2Q12926 359 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms