RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 TPH2Q8IWU9 490 aa7.17□□□□□ -1.26
SSB-209ENST00000470621 PRR18Q8N4B5 295 aa7.17□□□□□ -1.26
SSB-209ENST00000470621 CPT1CQ8TCG5 803 aa7.17□□□□□ -1.26
SSB-209ENST00000470621 NSUN6Q8TEA1 469 aaKnown RBP7.17□□□□□ -1.26
SSB-209ENST00000470621 JPH3Q8WXH2 748 aaPredicted RBP7.17□□□□□ -1.26
SSB-209ENST00000470621 CLPTM1LQ96KA5 538 aa7.17□□□□□ -1.26
SSB-209ENST00000470621 CDH19Q9H159 772 aa7.17□□□□□ -1.26
SSB-209ENST00000470621 VPS11Q9H270 941 aa7.17□□□□□ -1.26
SSB-209ENST00000470621 EIF2B4Q9UI10 523 aaKnown RBP7.17□□□□□ -1.26
SSB-209ENST00000470621 G3BP2Q9UN86 482 aaKnown RBP7.17□□□□□ -1.26
SSB-209ENST00000470621 TCRBV7S2A1N4TA0A589 114 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 AHRRA9YTQ3 701 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 PRSS23O95084 383 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 ZFP36P26651 326 aaKnown RBP7.16□□□□□ -1.26
SSB-209ENST00000470621 SLC6A4P31645 630 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
SSB-209ENST00000470621 CTXN1P60606 82 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 TLE1Q04724 770 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 FAM102AQ5T9C2 384 aaPredicted RBP7.16□□□□□ -1.26
SSB-209ENST00000470621 USP45Q70EL2 814 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 JDP2Q8WYK2 163 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 VRK1Q99986 396 aaPredicted RBP7.16□□□□□ -1.26
SSB-209ENST00000470621 C11orf54Q9H0W9 315 aaPredicted RBP7.16□□□□□ -1.26
SSB-209ENST00000470621 ANKRD6Q9Y2G4 727 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 CHST2Q9Y4C5 530 aa7.16□□□□□ -1.26
SSB-209ENST00000470621 KIAA0391O15091 583 aaKnown RBP7.15□□□□□ -1.26
SSB-209ENST00000470621 PPM1GO15355 546 aaPredicted RBP7.15□□□□□ -1.26
SSB-209ENST00000470621 TEX33O43247 280 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 ITGB1P05556 798 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 CT47B1P0C2W7 299 aaPredicted RBP7.15□□□□□ -1.26
SSB-209ENST00000470621 ZNF267Q14586 743 aaPredicted RBP7.15□□□□□ -1.26
SSB-209ENST00000470621 MED25Q71SY5 747 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 DRC7Q8IY82 874 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 Q8N1X5 172 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 PARPBPQ9NWS1 579 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 TRPM5Q9NZQ8 1165 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 KLHL42Q9P2K6 505 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 CLCA2Q9UQC9 943 aa7.15□□□□□ -1.26
SSB-209ENST00000470621 CFAP20Q9Y6A4 193 aaKnown RBP7.15□□□□□ -1.26
SSB-209ENST00000470621 PRPF3O43395 683 aaKnown RBP7.14□□□□□ -1.27
SSB-209ENST00000470621 RPS6KA4O75676 772 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 SCGB1D2O95969 90 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 CD1AP06126 327 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 MGAT1P26572 445 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 UBXN2BQ14CS0 331 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 PDCD4Q53EL6 469 aaKnown RBP7.14□□□□□ -1.27
SSB-209ENST00000470621 DACT2Q5SW24 774 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 FNDC7Q5VTL7 733 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 PPP4R3AQ6IN85 833 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 CRIP3Q6Q6R5 217 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 GDF7Q7Z4P5 450 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 NUP88Q99567 741 aaPredicted RBP7.14□□□□□ -1.27
SSB-209ENST00000470621 SLC2A4RGQ9NR83 387 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 USP15Q9Y4E8 981 aaPredicted RBP7.14□□□□□ -1.27
SSB-209ENST00000470621 EID1Q9Y6B2 187 aa7.14□□□□□ -1.27
SSB-209ENST00000470621 E2F8A0AVK6 867 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 CCDC78A2IDD5 438 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 TRIM24O15164 1050 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 GRM6O15303 877 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 POMCP01189 267 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 TUBA3CQ13748 450 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 LSM12Q3MHD2 195 aaKnown RBP7.13□□□□□ -1.27
SSB-209ENST00000470621 FLYWCH1Q4VC44 716 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 KHDC1Q4VXA5 237 aaKnown RBP7.13□□□□□ -1.27
SSB-209ENST00000470621 TUBA3EQ6PEY2 450 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 LRGUKQ96M69 825 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 ZNF341Q9BYN7 854 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 SLC12A5Q9H2X9 1139 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 GPRC5BQ9NZH0 403 aa7.13□□□□□ -1.27
SSB-209ENST00000470621 NOB1Q9ULX3 412 aaKnown RBP7.13□□□□□ -1.27
SSB-209ENST00000470621 CDHR4A6H8M9 788 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 NPIPB8E9PQR5 432 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 DTNBO60941 627 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 NCR1O76036 304 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 CREMQ03060 361 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 SNAPC2Q13487 334 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 RAB39AQ14964 217 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 NFE2Q16621 373 aaPredicted RBP7.12□□□□□ -1.27
SSB-209ENST00000470621 PGS1Q32NB8 556 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 AGAP9Q5VTM2 703 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 GADL1Q6ZQY3 521 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 TTC7BQ86TV6 843 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 ZFPM1Q8IX07 1006 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 ZNF276Q8N554 614 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 MVB12AQ96EY5 273 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 GSTO2Q9H4Y5 243 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 ANLNQ9NQW6 1124 aa7.12□□□□□ -1.27
SSB-209ENST00000470621 SUV39H1O43463 412 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 C6P13671 934 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 MALP21145 153 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 AKAP5P24588 427 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 MAP2K6P52564 334 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 ATAT1Q5SQI0 421 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 IFIT1BQ5T764 474 aaKnown RBP7.11□□□□□ -1.27
SSB-209ENST00000470621 GRAMD1CQ8IYS0 662 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 OR56A1Q8NGH5 318 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 HPS3Q969F9 1004 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 RGMAQ96B86 450 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 ZSWIM1Q9BR11 485 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 FAM30AQ9NZY2 134 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms