RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 RFXAPO00287 272 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 FOSP01100 380 aaPredicted RBP6.62□□□□□ -1.35
RBM39-227ENST00000470563 ANXA1P04083 346 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 NPR1P16066 1061 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 PCSK1P29120 753 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 CNGA2Q16280 664 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 FLYWCH1Q4VC44 716 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 PABPC1LQ4VXU2 614 aaKnown RBP6.62□□□□□ -1.35
RBM39-227ENST00000470563 INO80DQ53TQ3 878 aaPredicted RBP6.62□□□□□ -1.35
RBM39-227ENST00000470563 CCDC157Q569K6 752 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 FRMD5Q7Z6J6 570 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 ZDHHC14Q8IZN3 488 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 CMTM4Q8IZR5 234 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 OR10H5Q8NGA6 315 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 FAM84AQ96KN4 292 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 RIPOR3Q96MK2 946 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 UHRF1Q96T88 793 aaPredicted RBP6.62□□□□□ -1.35
RBM39-227ENST00000470563 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 HERPUD2Q9BSE4 406 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 TRIM54Q9BYV2 358 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 WDR12Q9GZL7 423 aaKnown RBP6.62□□□□□ -1.35
RBM39-227ENST00000470563 KCNH6Q9H252 994 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 KIAA1586Q9HCI6 787 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 AJAP1Q9UKB5 411 aaPredicted RBP6.62□□□□□ -1.35
RBM39-227ENST00000470563 PCDHA3Q9Y5H8 950 aa6.62□□□□□ -1.35
RBM39-227ENST00000470563 THP07101 528 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 TSHRP16473 764 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 GZMKP49863 264 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 FMO1Q01740 532 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 PTH1RQ03431 593 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 MRPL49Q13405 166 aaKnown RBP6.61□□□□□ -1.35
RBM39-227ENST00000470563 DAG1Q14118 895 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 PRAMEF14Q5SWL7 426 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 RALYLQ86SE5 291 aaKnown RBP6.61□□□□□ -1.35
RBM39-227ENST00000470563 PDSS2Q86YH6 399 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 DCBLD1Q8N8Z6 715 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 CCHCR1Q8TD31 782 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 ADAMTS17Q8TE56 1095 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 PARD3BQ8TEW8 1205 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 ATXN2LQ8WWM7 1075 aaKnown RBP6.61□□□□□ -1.35
RBM39-227ENST00000470563 CFHR4Q92496 578 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 LCORQ96JN0 433 aaPredicted RBP6.61□□□□□ -1.35
RBM39-227ENST00000470563 PWWP2AQ96N64 755 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 TBCBQ99426 244 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 CDC5LQ99459 802 aaKnown RBP6.61□□□□□ -1.35
RBM39-227ENST00000470563 VRK1Q99986 396 aaPredicted RBP6.61□□□□□ -1.35
RBM39-227ENST00000470563 C11orf54Q9H0W9 315 aaPredicted RBP6.61□□□□□ -1.35
RBM39-227ENST00000470563 PTPRHQ9HD43 1115 aa6.61□□□□□ -1.35
RBM39-227ENST00000470563 FFAR3O14843 346 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 FGF18O76093 207 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 IL18RAPO95256 599 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 TSPAN15O95858 294 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 ZNF888P0CJ79 500 aaPredicted RBP6.6□□□□□ -1.35
RBM39-227ENST00000470563 MTHFD1P11586 935 aaKnown RBP6.6□□□□□ -1.35
RBM39-227ENST00000470563 SYN1P17600 705 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 BPIFB4P59827 614 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 TCF15Q12870 199 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 RAPGEF1Q13905 1077 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 SSPNQ14714 243 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 KIF22Q14807 665 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 ZNF385BQ569K4 471 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 METTL24Q5JXM2 366 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 DOK3Q7L591 496 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 ADGRE4PQ86SQ3 457 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 TMEM151BQ8IW70 566 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 NLGN4YQ8NFZ3 816 aaPredicted RBP6.6□□□□□ -1.35
RBM39-227ENST00000470563 NT5C1BQ96P26 610 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 KIAA1683Q9H0B3 1180 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 ARFGAP3Q9NP61 516 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 PNPLA8Q9NP80 782 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 FNIP2Q9P278 1114 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 KCTD3Q9Y597 815 aa6.6□□□□□ -1.35
RBM39-227ENST00000470563 RBM8AQ9Y5S9 174 aaKnown RBP6.6□□□□□ -1.35
RBM39-227ENST00000470563 RRBP1Q9P2E9 1410 aaKnown RBP6.59□□□□□ -1.35
RBM39-227ENST00000470563 A0A1W2PPC4 97 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 B5MCH6 92 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 TBX3O15119 743 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 SLC26A4O43511 780 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 SLC43A1O75387 559 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 MATN4O95460 622 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 CYP1A1P04798 512 aaPredicted RBP6.59□□□□□ -1.35
RBM39-227ENST00000470563 MYL3P08590 195 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 PI3P19957 117 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 PIK3CGP48736 1102 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 STK3Q13188 491 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 TBR1Q16650 682 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 HSP90AB4PQ58FF6 505 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 PPP1R3BQ86XI6 285 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 ZNF761Q86XN6 746 aaPredicted RBP6.59□□□□□ -1.35
RBM39-227ENST00000470563 NKAPQ8N5F7 415 aaKnown RBP6.59□□□□□ -1.35
RBM39-227ENST00000470563 LINC01356Q8N9X3 169 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 ZNF526Q8TF50 670 aaPredicted RBP6.59□□□□□ -1.35
RBM39-227ENST00000470563 PPM1EQ8WY54 764 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 DDX17Q92841 729 aaKnown RBP6.59□□□□□ -1.35
RBM39-227ENST00000470563 GPHA2Q96T91 129 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 BRIP1Q9BX63 1249 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 EIF2AQ9BY44 585 aaKnown RBP6.59□□□□□ -1.35
RBM39-227ENST00000470563 SEC61A2Q9H9S3 476 aa6.59□□□□□ -1.35
RBM39-227ENST00000470563 ZNF287Q9HBT7 754 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms