RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 GRPEL1Q9HAV7 217 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 POLD4Q9HCU8 107 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 XPNPEP3Q9NQH7 507 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 PAK6Q9NQU5 681 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 CCDC39Q9UFE4 941 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 GPN3Q9UHW5 284 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 DNAH12Q6ZR08 3092 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 KDM3AQ9Y4C1 1321 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 NPHP3-ACAD11A0A0J9YXS1 232 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 MYMKA6NI61 221 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 KINO60870 393 aaKnown RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 EYA4O95677 639 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 F2P00734 622 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PLA2G4BP0C869 781 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CYP11B2P19099 503 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 MUTP22033 750 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 RARRES1P49788 294 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 LIG3P49916 1009 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PURAQ00577 322 aaKnown RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PNOCQ13519 176 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CUL4BQ13620 913 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PLCB4Q15147 1175 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 DGKDQ16760 1214 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SHISA2Q6UWI4 295 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 AGMOQ6ZNB7 445 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PLPPR4Q7Z2D5 763 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 DMRTC2Q8IXT2 367 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 IL22RA1Q8N6P7 574 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SYT2Q8N9I0 419 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 RNF214Q8ND24 703 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PHC3Q8NDX5 983 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 TRAPPC12Q8WVT3 735 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 GLG1Q92896 1179 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 ATP6V0A1Q93050 837 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 ZBTB10Q96DT7 871 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CDK5RAP3Q96JB5 506 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF333Q96JL9 665 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 RHOVQ96L33 236 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 TIGD1Q96MW7 591 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 RUSC1Q9BVN2 902 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 AP5M1Q9H0R1 490 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 BLZF1Q9H2G9 400 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CLSTN2Q9H4D0 955 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 TCEAL9Q9UHQ7 104 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 DNM3Q9UQ16 869 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PPME1Q9Y570 386 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 HAS3O00219 553 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SLC26A4O43511 780 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 KLRC4O43908 158 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SSBP05455 408 aaKnown RBP eCLIP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 ASGR1P07306 291 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CCL5P13501 91 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CST5P28325 142 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 GBP2P32456 591 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 GJA8P48165 433 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CPT1AP50416 773 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SOX10P56693 466 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 LRRC41Q15345 812 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 TARBP2Q15633 366 aaKnown RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 KCNA10Q16322 511 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 XKR3Q5GH77 459 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 RINT1Q6NUQ1 792 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CXCL17Q6UXB2 119 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 RBM43Q6ZSC3 357 aaKnown RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 C1orf186Q6ZWK4 172 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 DYMQ7RTS9 669 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CKAP2LQ8IYA6 745 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CEP57L1Q8IYX8 460 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SPATA20Q8TB22 786 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 ATP8B4Q8TF62 1192 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 WFDC12Q8WWY7 111 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SREK1Q8WXA9 508 aaKnown RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 ARMC5Q96C12 935 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 DNAJC19Q96DA6 116 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 DEFB118Q96PH6 123 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 TRIM9Q9C026 710 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 RNF208Q9H0X6 261 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 NUP62CLQ9H1M0 184 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 CUEDC2Q9H467 287 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 SMARCAD1Q9H4L7 1026 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 AZI2Q9H6S1 392 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 ERAP1Q9NZ08 941 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 DBR1Q9UK59 544 aaKnown RBP5.24□□□□□ -1.57
SF3B1-208ENST00000470268 PCDHA5Q9Y5H7 936 aa5.24□□□□□ -1.57
SF3B1-208ENST00000470268 GRIN2DO15399 1336 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 RSPH10B2B2RC85 870 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 SOX1O00570 391 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 PAGE1O75459 146 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MYL3P08590 195 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 RSPH10BP0C881 870 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 INSRRP14616 1297 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 PTMSP20962 102 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 BMP6P22004 513 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 NME2P22392 152 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 SARSP49591 514 aaKnown RBP5.23□□□□□ -1.57
SF3B1-208ENST00000470268 LMNB2Q03252 620 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 MAPK7Q13164 816 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 DRP2Q13474 957 aa5.23□□□□□ -1.57
SF3B1-208ENST00000470268 POSTNQ15063 836 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms