RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 EFCAB13Q8IY85 973 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 DAW1Q8N136 415 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 FBXL13Q8NEE6 735 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 IL31RAQ8NI17 732 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 UBLCP1Q8WVY7 318 aaPredicted RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 POMGNT1Q8WZA1 660 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 DHX38Q92620 1227 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 CEP170P1Q96L14 293 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 RNPC3Q96LT9 517 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 ZIM3Q96PE6 472 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 TAAR1Q96RJ0 339 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 RPS6KC1Q96S38 1066 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 MPHOSPH6Q99547 160 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 AP1M1Q9BXS5 423 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 GLIS2Q9BZE0 524 aaPredicted RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 ACAD9Q9H845 621 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 UVRAGQ9P2Y5 699 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.59□□□□□ -1.035e-47■■■■■ 274.1
SMC4-212ENST00000470240 SMCHD1A6NHR9 2005 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 PHIPQ8WWQ0 1821 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 ESYT3A0FGR9 886 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 DENND3A2RUS2 1198 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 VWA5AO00534 786 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 HNRNPDLO14979 420 aaKnown RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 SPOPO43791 374 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 KIAA0754O94854 1291 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 FTLP02792 175 aaPredicted RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 ADH1AP07327 375 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 MYBL1P10243 752 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 NR1D1P20393 614 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 MAN1A1P33908 653 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 LIG4P49917 911 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 PTENP60484 403 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 MRPS9P82933 396 aaKnown RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 NFX1Q12986 1120 aaKnown RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 BRDTQ58F21 947 aaPredicted RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 CEP85LQ5SZL2 805 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 SNRNP48Q6IEG0 339 aaKnown RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 KDM7AQ6ZMT4 941 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 MAP4K3Q8IVH8 894 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 GPD1LQ8N335 351 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 PPM1KQ8N3J5 372 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 ZNF280CQ8ND82 737 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 RIN2Q8WYP3 895 aaPredicted RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 ZNF653Q96CK0 615 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 ATP6V1G3Q96LB4 118 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 FNBP1Q96RU3 617 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 CBWD1Q9BRT8 395 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 DDX47Q9H0S4 455 aaKnown RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 THAP2Q9H0W7 228 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 STMN4Q9H169 189 aaPredicted RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 JPH1Q9HDC5 661 aaPredicted RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 POLMQ9NP87 494 aaPredicted RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 COL20A1Q9P218 1284 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 GABBR1Q9UBS5 961 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 RSPH14Q9UHP6 348 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 AJAP1Q9UKB5 411 aaPredicted RBP8.58□□□□□ -1.04
SMC4-212ENST00000470240 PLAAQ9Y263 795 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 PPP2R3BQ9Y5P8 575 aa8.58□□□□□ -1.04
SMC4-212ENST00000470240 MYPNQ86TC9 1320 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 ZNF233A6NK53 670 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 SRRM3A6NNA2 597 aaPredicted RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 TMEM110-MUSTN1A8MSY1 372 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 FOXN3O00409 490 aaPredicted RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 PODXLO00592 558 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 EIF3HO15372 352 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMC4-212ENST00000470240 SPINT1O43278 529 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 LILRA1O75019 489 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 PHF2O75151 1096 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 MTA2O94776 668 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 LDHAP00338 332 aaKnown RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 CETN2P41208 172 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 NPTX2P47972 431 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 GPC3P51654 580 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 POLGP54098 1239 aaPredicted RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 BACE1P56817 501 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 ERVK-9P63128 1117 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 MRPS25P82663 173 aaKnown RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 MAP2K1Q02750 393 aaPredicted RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 PPATQ06203 517 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 SPP2Q13103 211 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 BAATQ14032 418 aaPredicted RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 ODF2Q5BJF6 829 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 AGBL2Q5U5Z8 902 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 SLFN12LQ6IEE8 588 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 PHLDB3Q6NSJ2 640 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 LRRC31Q6UY01 552 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 SRLQ86TD4 932 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 VSIG10LQ86VR7 867 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 IQCKQ8N0W5 287 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 TMEM161BQ8NDZ6 487 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 CCDC127Q96BQ5 260 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 ATG4CQ96DT6 458 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 C12orf42Q96LP6 360 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 FMO2Q99518 471 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 HINFPQ9BQA5 517 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 ZSWIM1Q9BR11 485 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 SYT11Q9BT88 431 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 TEX13BQ9BXU2 312 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms