RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CTXN1P60606 82 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 ABHD18Q0P651 414 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 TARDBPQ13148 414 aaKnown RBP eCLIP5.18□□□□□ -1.58
BRCA2-202ENST00000470094 FNDC7Q5VTL7 733 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 GADL1Q6ZQY3 521 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 MED25Q71SY5 747 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 UBE3BQ7Z3V4 1068 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 CPA6Q8N4T0 437 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 HAS1Q92839 578 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 KAT5Q92993 513 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 MYOCQ99972 504 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 C11orf54Q9H0W9 315 aaPredicted RBP5.18□□□□□ -1.58
BRCA2-202ENST00000470094 MMRN2Q9H8L6 949 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 CHST2Q9Y4C5 530 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 CFAP20Q9Y6A4 193 aaKnown RBP5.18□□□□□ -1.58
BRCA2-202ENST00000470094 RNASET2O00584 256 aaKnown RBP5.17□□□□□ -1.58
BRCA2-202ENST00000470094 KIAA0391O15091 583 aaKnown RBP5.17□□□□□ -1.58
BRCA2-202ENST00000470094 ITGB1P05556 798 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 ADH4P08319 380 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 CT47B1P0C2W7 299 aaPredicted RBP5.17□□□□□ -1.58
BRCA2-202ENST00000470094 PTTG1IPP53801 180 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 RAB39AQ14964 217 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 UBXN2BQ14CS0 331 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 TTF1Q15361 905 aaPredicted RBP5.17□□□□□ -1.58
BRCA2-202ENST00000470094 FAM102AQ5T9C2 384 aaPredicted RBP5.17□□□□□ -1.58
BRCA2-202ENST00000470094 IGFL4Q6B9Z1 124 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 IFI44Q8TCB0 444 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 CLIP3Q96DZ5 547 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 HOOK2Q96ED9 719 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 HSPBAP1Q96EW2 488 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 CLPTM1LQ96KA5 538 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 TMPRSS5Q9H3S3 457 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 ZNF768Q9H5H4 540 aaKnown RBP5.17□□□□□ -1.58
BRCA2-202ENST00000470094 AKIP1Q9NQ31 210 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 GPRC5BQ9NZH0 403 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 FAM30AQ9NZY2 134 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 SRRDQ9UH36 339 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 ATP11BQ9Y2G3 1177 aa5.17□□□□□ -1.58
BRCA2-202ENST00000470094 USP15Q9Y4E8 981 aaPredicted RBP5.17□□□□□ -1.58
BRCA2-202ENST00000470094 TCRBV7S2A1N4TA0A589 114 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 GAGE12BA1L429 117 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 GAGE12HA6NDE8 117 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 ZNF185O15231 689 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 LAG3P18627 525 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 VCAM1P19320 739 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 NR4A1P22736 598 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 FAM189BP81408 668 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 TIGD2Q4W5G0 525 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 PDCD4Q53EL6 469 aaKnown RBP5.16□□□□□ -1.58
BRCA2-202ENST00000470094 DACT2Q5SW24 774 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 AGAP9Q5VTM2 703 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 TSHZ3Q63HK5 1081 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 LRRC55Q6ZSA7 311 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 TTC7BQ86TV6 843 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 RHOT2Q8IXI1 618 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 NLGN4YQ8NFZ3 816 aaPredicted RBP5.16□□□□□ -1.58
BRCA2-202ENST00000470094 LENG9Q96B70 501 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 PUS7Q96PZ0 661 aaKnown RBP5.16□□□□□ -1.58
BRCA2-202ENST00000470094 MAN1C1Q9NR34 630 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 FBXO34Q9NWN3 711 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 CALCOCO1Q9P1Z2 691 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 IP6K2Q9UHH9 426 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 FZD1Q9UP38 647 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 PCDHB1Q9Y5F3 818 aa5.16□□□□□ -1.58
BRCA2-202ENST00000470094 E2F8A0AVK6 867 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 CYR61O00622 381 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 NCR1O76036 304 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 HLA-DOAP06340 250 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 MTHFD1P11586 935 aaKnown RBP5.15□□□□□ -1.59
BRCA2-202ENST00000470094 ACVRL1P37023 503 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 MXRA7P84157 204 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 METRNLQ641Q3 311 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 FITM2Q8N6M3 262 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 DCBLD1Q8N8Z6 715 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 SLC16A11Q8NCK7 471 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 OR56A1Q8NGH5 318 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 NSUN6Q8TEA1 469 aaKnown RBP5.15□□□□□ -1.59
BRCA2-202ENST00000470094 MYEOVQ96EZ4 313 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 MRGPRX4Q96LA9 322 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 NEU1Q99519 415 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 NUP88Q99567 741 aaPredicted RBP5.15□□□□□ -1.59
BRCA2-202ENST00000470094 SCAND2PQ9GZW5 306 aaPredicted RBP5.15□□□□□ -1.59
BRCA2-202ENST00000470094 TCF7L1Q9HCS4 588 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 FPGT-TNNI3KV9GXZ4 949 aa5.15□□□□□ -1.59
BRCA2-202ENST00000470094 CDHR4A6H8M9 788 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 GRM6O15303 877 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 HAUS5O94927 633 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 NDUFA10O95299 355 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 ABHD16AO95870 558 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 CD1AP06126 327 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 PF4V1P10720 104 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 PDCP20941 246 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 GCSHP23434 173 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 SLC6A2P23975 617 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 EPHB1P54762 984 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 ZNF280AP59817 542 aaPredicted RBP5.14□□□□□ -1.59
BRCA2-202ENST00000470094 TLE1Q04724 770 aa5.14□□□□□ -1.59
BRCA2-202ENST00000470094 MCL1Q07820 350 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms