RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GPD1LQ8N335 351 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 MAGEC3Q8TD91 643 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 C1orf54Q8WWF1 131 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 TRIM11Q96F44 468 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 PRMT1Q99873 361 aaKnown RBP14.59□□□□□ -0.07
BRCA1-209ENST00000470026 MOV10L1Q9BXT6 1211 aaKnown RBP14.59□□□□□ -0.07
BRCA1-209ENST00000470026 DCLK3Q9C098 648 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 SLC12A4Q9UP95 1085 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 OAS1P00973 400 aaKnown RBP14.58□□□□□ -0.08
BRCA1-209ENST00000470026 CAV1Q03135 178 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 BRDTQ58F21 947 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-209ENST00000470026 CYB5D1Q6P9G0 228 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 CPXCR1Q8N123 301 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 ANKS4BQ8N8V4 417 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 UHMK1Q8TAS1 419 aaKnown RBP14.58□□□□□ -0.08
BRCA1-209ENST00000470026 SNF8Q96H20 258 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 HERPUD2Q9BSE4 406 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 DDX23Q9BUQ8 820 aaKnown RBP14.58□□□□□ -0.08
BRCA1-209ENST00000470026 MTFR1LQ9H019 292 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 CHST7Q9NS84 486 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 ANAPC7Q9UJX3 599 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 ADGRA3Q8IWK6 1321 aa14.58□□□□□ -0.08
BRCA1-209ENST00000470026 PARP14Q460N5 1801 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 SMIM23A6NLE4 172 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 SORBS3O60504 671 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 TTC4O95801 387 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 SCP2P22307 547 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 CHKAP35790 457 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 SLCO1A2P46721 670 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 CENPCQ03188 943 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 KLF1Q13351 362 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-209ENST00000470026 RELL1Q8IUW5 271 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 AGBL3Q8NEM8 1001 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 GRK7Q8WTQ7 553 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 RMDN3Q96TC7 470 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 HOMER3Q9NSC5 361 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 GINM1Q9NU53 330 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 ZBTB12Q9Y330 459 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-209ENST00000470026 PCDHB2Q9Y5E7 798 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 PCDHA10Q9Y5I2 948 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 ZNF862O60290 1169 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 TBC1D10BQ4KMP7 808 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-209ENST00000470026 MON1BQ7L1V2 547 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 OTUD6AQ7L8S5 288 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 TAS1R3Q7RTX0 852 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 CCDC50Q8IVM0 306 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 RTKN2Q8IZC4 609 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 POMGNT1Q8WZA1 660 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 ZNF516Q92618 1163 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 GPRASP2Q96D09 838 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 TRIM7Q9C029 511 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 HAUS2Q9NVX0 235 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.57□□□□□ -0.087e-7■□□□□ 9.9
BRCA1-209ENST00000470026 ARHGAP28Q9P2N2 729 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 UMODL1Q5DID0 1318 aa14.57□□□□□ -0.08
BRCA1-209ENST00000470026 MGRN1O60291 552 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 SNX3O60493 162 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 RRM1P23921 792 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 GSCP56915 257 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-209ENST00000470026 VSTM1Q6UX27 236 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 VSIG10LQ86VR7 867 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 PARP9Q8IXQ6 854 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 IPO4Q8TEX9 1081 aaKnown RBP14.56□□□□□ -0.08
BRCA1-209ENST00000470026 ZKSCAN4Q969J2 545 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-209ENST00000470026 NSRP1Q9H0G5 558 aaKnown RBP14.56□□□□□ -0.08
BRCA1-209ENST00000470026 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 MAFGO15525 162 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 PROSCO94903 275 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 FDX1P10109 184 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 MYCLP12524 364 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-209ENST00000470026 KRT5P13647 590 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 ATP5DP30049 168 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 ABCD1P33897 745 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 BPIFB4P59827 614 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 PSMD6Q15008 389 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 LONRF1Q17RB8 773 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 ZACNQ401N2 412 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 MCPH1Q8NEM0 835 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 ATL2Q8NHH9 583 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 ARHGEF2Q92974 986 aaKnown RBP14.56□□□□□ -0.08
BRCA1-209ENST00000470026 PI4K2AQ9BTU6 479 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 TRAIPQ9BWF2 469 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 KIAA1586Q9HCI6 787 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 XPNPEP1Q9NQW7 623 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 C1orf112Q9NSG2 853 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 ASIC3Q9UHC3 531 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 LGALS13Q9UHV8 139 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 STYXL1Q9Y6J8 313 aa14.56□□□□□ -0.08
BRCA1-209ENST00000470026 PSTPIP1O43586 416 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 DKC1O60832 514 aaKnown RBP eCLIP14.55□□□□□ -0.08
BRCA1-209ENST00000470026 DGAT1O75907 488 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 GAS8O95995 478 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 ACO1P21399 889 aaKnown RBP14.55□□□□□ -0.08
BRCA1-209ENST00000470026 ITGA8P53708 1063 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 CCNG2Q16589 344 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 FAM228AQ86W67 206 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 CCDC25Q86WR0 208 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 CEP170P1Q96L14 293 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 ELAC2Q9BQ52 826 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms