RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 CARNMT1Q8N4J0 409 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 ENOX1Q8TC92 643 aaKnown RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 GPT2Q8TD30 523 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 MED15Q96RN5 788 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 MTMR4Q9NYA4 1195 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 PACSIN2Q9UNF0 486 aaPredicted RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 TRAF3IP3Q9Y228 551 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 A2ML1A8K2U0 1454 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 CDK12Q9NYV4 1490 aaPredicted RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 A0A0G2JND7 137 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 KCNN4O15554 427 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 NDUFS3O75489 264 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 DGAT1O75907 488 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 CKMP06732 381 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 ZFXP17010 805 aaPredicted RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 PCSK1P29120 753 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 CCT5P48643 541 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 EPHB4P54760 987 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 PRR23CQ6ZRP0 262 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 COL23A1Q86Y22 540 aaPredicted RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 FBXO16Q8IX29 292 aaPredicted RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 PCSK9Q8NBP7 692 aaKnown RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 UBA3Q8TBC4 463 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 MRPS31Q92665 395 aaKnown RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 TUFT1Q9NNX1 390 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 DDX56Q9NY93 547 aaKnown RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 LCMT1Q9UIC8 334 aa7.44□□□□□ -1.22
CD46-212ENST00000469535 NOVA2Q9UNW9 492 aaKnown RBP7.44□□□□□ -1.22
CD46-212ENST00000469535 CYP26A1O43174 497 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 HBP1O60381 514 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 KRT38O76015 456 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 PRCPP42785 496 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 RFX3P48380 749 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 SESN2P58004 480 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 GOLGA7BQ2TAP0 167 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 TBC1D1Q86TI0 1168 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 OTUB1Q96FW1 271 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 CLMNQ96JQ2 1002 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 APOL5Q9BWW9 433 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 ASPSCR1Q9BZE9 553 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 CHCHD3Q9NX63 227 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 HSPBP1Q9NZL4 362 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 SNX24Q9Y343 169 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 DDX5P17844 614 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 MZF1P28698 734 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 CDC27P30260 824 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 SFSWAPQ12872 951 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 ZRANB3Q5FWF4 1079 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 KRT80Q6KB66 452 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 TBKBP1A7MCY6 615 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 C5orf58C9J3I9 102 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 KLRC2P26717 231 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 NT5C2P49902 561 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 PTRHD1Q6GMV3 140 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 SHCBP1Q8NEM2 672 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 PDE11AQ9HCR9 933 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 ENDOD1O94919 500 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 CAMTA2O94983 1202 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 CKBP12277 381 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 FOXO4P98177 505 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 RESP18Q5W5W9 173 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 CPA5Q8WXQ8 436 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 MRFAP1L1Q96HT8 127 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 TAAR1Q96RJ0 339 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 SENP7Q9BQF6 1050 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 TRIM55Q9BYV6 548 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 CDC23Q9UJX2 597 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 NR2E3Q9Y5X4 410 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 SPATA31A5Q5VU36 1347 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 SPATA31A7Q8IWB4 1347 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 EYA4O95677 639 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 ATP1A1P05023 1023 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 ESRRAP11474 423 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 SKIP12755 728 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 NCAM1P13591 858 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 NCOA4Q13772 614 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 PATL1Q86TB9 770 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 AGBL3Q8NEM8 1001 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 ELMO2Q96JJ3 720 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 MAD2L2Q9UI95 211 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 GTPBP10A4D1E9 387 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 MEFVO15553 781 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 ETF1P62495 437 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 ZNF543Q08ER8 600 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 RESTQ13127 1097 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 PLCL1Q15111 1095 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 DCAF6Q58WW2 860 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 TMED8Q6PL24 325 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 HHIPL2Q6UWX4 724 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 CINPQ9BW66 212 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 FAF1Q9UNN5 650 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 C3orf70A6NLC5 250 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 VTNP04004 478 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 MYBL1P10243 752 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 HOXA7P31268 230 aaPredicted RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 ITPK1Q13572 414 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 KRT72Q14CN4 511 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 MORF4L2Q15014 288 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms