RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 STX2P32856 288 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 TMED2Q15363 201 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 KAZNQ674X7 775 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 MFSD5Q6N075 450 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 CYFIP1Q7L576 1253 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 PODNQ7Z5L7 613 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 BSNDQ8WZ55 320 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
VARS2-205ENST00000469358 CCDC134Q9H6E4 229 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 ARHGEF10LQ9HCE6 1279 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 LTBP1Q14766 1721 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 SCN9AQ15858 1988 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 FSCN2O14926 492 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 MFAP3P55082 362 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 TAS2R40P59535 323 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 SV2AQ7L0J3 742 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 P3H4Q92791 437 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 TMEM206Q9H813 350 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 UBE4BO95155 1302 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 GSTTP1A0A1W2PQM5 241 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 BANF1O75531 89 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 MMP10P09238 476 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 GZMAP12544 262 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 KRT10P13645 584 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 ATF2P15336 505 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 NPR1P16066 1061 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 CNGA1P29973 690 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 CHRNA5P30532 468 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 SLC8A1P32418 973 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 WNT7BP56706 349 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 FASTKD3Q14CZ7 662 aaKnown RBP12.88□□□□□ -0.35
VARS2-205ENST00000469358 XKR9Q5GH70 373 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 PARD3BQ8TEW8 1205 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 HAUS1Q96CS2 278 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 SNF8Q96H20 258 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
VARS2-205ENST00000469358 SUN1O94901 812 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 COPS2P61201 443 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
VARS2-205ENST00000469358 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 ACAD10Q6JQN1 1059 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 TRMT10CQ7L0Y3 403 aaKnown RBP12.88□□□□□ -0.35
VARS2-205ENST00000469358 ECHDC2Q86YB7 292 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 MIEF2Q96C03 454 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 RUNDC3BQ96NL0 473 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 C11orf70Q9BRQ4 267 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 CCPG1Q9ULG6 757 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 DENND3A2RUS2 1198 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 C21orf2O43822 256 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 GGPS1O95749 300 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 P4HBP07237 508 aaKnown RBP12.88□□□□□ -0.35
VARS2-205ENST00000469358 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 KRT39Q6A163 491 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 C4orf33Q8N1A6 199 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 CKAP2Q8WWK9 683 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
VARS2-205ENST00000469358 C10orf88Q9H8K7 445 aa12.88□□□□□ -0.35
VARS2-205ENST00000469358 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 MTA2O94776 668 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 RFX1P22670 979 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 WDR4P57081 412 aaKnown RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 BNIP1Q12981 228 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 NT5C1BQ96P26 610 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 TMEM39BQ9GZU3 492 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 STMN4Q9H169 189 aaPredicted RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 RANBP17Q9H2T7 1088 aaKnown RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 C12orf65Q9H3J6 166 aaKnown RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 ATP6V0A4Q9HBG4 840 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 GSTA1P08263 222 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 SERPINB12Q96P63 405 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 CEP83Q9Y592 693 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 RASA4BC9J798 803 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 RASA4O43374 803 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 NPTX2P47972 431 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 GTF2BQ00403 316 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 IZUMO3Q5VZ72 239 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 GSTA5Q7RTV2 222 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
VARS2-205ENST00000469358 ZNF570Q96NI8 536 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 KCND2Q9NZV8 630 aa12.87□□□□□ -0.35
VARS2-205ENST00000469358 WHRNQ9P202 907 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms