RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-217ENST00000469223 URB1O60287 2271 aaKnown RBP14.08□□□□□ -0.16
HDAC6-217ENST00000469223 PLXNB3Q9ULL4 1909 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 SPAARA0A1B0GVQ0 90 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CASTOR2A6NHX0 329 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 SPECC1L-ADORA2AF8WAN1 911 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 HIP1O00291 1037 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 MAFO75444 373 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CYP3A4P08684 503 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CTHP32929 405 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CCR2P41597 374 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 NUCB1Q02818 461 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CCINQ13939 588 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 RAB33AQ14088 237 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 PON2Q15165 354 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 ELF2Q15723 593 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 PLA2G4FQ68DD2 849 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 C1orf228Q6PIY5 440 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 GSTCDQ8NEC7 633 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 TTC8Q8TAM2 541 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CPB2Q96IY4 423 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 ZSWIM3Q96MP5 696 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 NIFKQ9BYG3 293 aaKnown RBP14.07□□□□□ -0.16
HDAC6-217ENST00000469223 OSBPL3Q9H4L5 887 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CDY1Q9Y6F8 540 aa14.07□□□□□ -0.16
HDAC6-217ENST00000469223 CCDC163A0A0D9SF12 145 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 BCLAF3A2AJT9 711 aaKnown RBP14.06□□□□□ -0.16
HDAC6-217ENST00000469223 SMCO2A6NFE2 343 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 CCDC69A6NI79 296 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 ERLIN2O94905 339 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 STBD1O95210 358 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 LRG1P02750 347 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 PRB1P04280 392 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 SRGAP2CP0DJJ0 459 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 PTPN2P17706 415 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 AKAP5P24588 427 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 XKR3Q5GH77 459 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 SRGAP1Q7Z6B7 1085 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 TEX2Q8IWB9 1127 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 HNRNPLLQ8WVV9 542 aaKnown RBP14.06□□□□□ -0.16
HDAC6-217ENST00000469223 LENG9Q96B70 501 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 LRIG1Q96JA1 1093 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 UNC45AQ9H3U1 944 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 C8orf33Q9H7E9 229 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-217ENST00000469223 KLK14Q9P0G3 267 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 GIT1Q9Y2X7 761 aa14.06□□□□□ -0.16
HDAC6-217ENST00000469223 HEPACAM2A8MVW5 462 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 PATE3B3GLJ2 98 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 CDX4O14627 284 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-217ENST00000469223 DCLK1O15075 740 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 TSPAN1O60635 241 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 GAS7O60861 476 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 JAK3P52333 1124 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 MLLT6P55198 1093 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-217ENST00000469223 SIM1P81133 766 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-217ENST00000469223 SCAPQ12770 1279 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 NOTUMQ6P988 496 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 PDXDC1Q6P996 788 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 CASC1Q6TDU7 716 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 PDZD4Q76G19 769 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-217ENST00000469223 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 MFSD6LQ8IWD5 586 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 PLEKHM2Q8IWE5 1019 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 YAF2Q8IY57 180 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 ZSCAN18Q8TBC5 510 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-217ENST00000469223 RSPRY1Q96DX4 576 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 TRIM6Q9C030 488 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-217ENST00000469223 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-217ENST00000469223 TEX15Q9BXT5 2789 aa14.05□□□□□ -0.16
HDAC6-217ENST00000469223 MYBPHLA2RUH7 354 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 SH2B2O14492 632 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-217ENST00000469223 PRC1O43663 620 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 SFNP31947 248 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 RTL10Q7L3V2 364 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 CHCHD4Q8N4Q1 142 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 GJA10Q969M2 543 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 CCDC51Q96ER9 411 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 HHIPQ96QV1 700 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 POLR3BQ9NW08 1133 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-217ENST00000469223 MTRRQ9UBK8 725 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 SLC8A2Q9UPR5 921 aa14.04□□□□□ -0.16
HDAC6-217ENST00000469223 PTPRBP23467 1997 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 DDX11L8A8MPP1 907 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 PRRG1O14668 218 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 ZNF197O14709 1029 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 KHNYNO15037 678 aaKnown RBP14.03□□□□□ -0.16
HDAC6-217ENST00000469223 ADAMTS3O15072 1205 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 MSH4O15457 936 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 EIF5BO60841 1220 aaKnown RBP14.03□□□□□ -0.16
HDAC6-217ENST00000469223 RHOBTB1O94844 696 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 GJA1P17302 382 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 PTH1RQ03431 593 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 C19orf57Q0VDD7 668 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 TUSC3Q13454 348 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 LRCH2Q5VUJ6 765 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-217ENST00000469223 MIER3Q7Z3K6 550 aa14.03□□□□□ -0.16
HDAC6-217ENST00000469223 RALGPS2Q86X27 583 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-217ENST00000469223 HACE1Q8IYU2 909 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms