RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 CBX2Q14781 532 aaPredicted RBP13.73□□□□□ -0.21
ABCF1-204ENST00000468958 RARS2Q5T160 578 aaKnown RBP13.73□□□□□ -0.21
ABCF1-204ENST00000468958 SLC39A4Q6P5W5 647 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 PRSS55Q6UWB4 352 aaPredicted RBP13.73□□□□□ -0.21
ABCF1-204ENST00000468958 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 HAUS6Q7Z4H7 955 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 RNF135Q8IUD6 432 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 PDILTQ8N807 584 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 KCNN1Q92952 543 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 DHX58Q96C10 678 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 SNX27Q96L92 541 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 PHF7Q9BWX1 381 aaPredicted RBP13.73□□□□□ -0.21
ABCF1-204ENST00000468958 PARVGQ9HBI0 331 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 RXFP1Q9HBX9 757 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 MRPL17Q9NRX2 175 aaKnown RBP13.73□□□□□ -0.21
ABCF1-204ENST00000468958 SEL1LQ9UBV2 794 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 MUTYHQ9UIF7 546 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 HOOK1Q9UJC3 728 aaKnown RBP13.73□□□□□ -0.21
ABCF1-204ENST00000468958 NOTCH4Q99466 2003 aa13.73□□□□□ -0.21
ABCF1-204ENST00000468958 DOCK8Q8NF50 2099 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 SMIM28A0A1B0GU29 152 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 MYMKA6NI61 221 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 TISP43B9A030 160 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 POLR2DO15514 142 aaKnown RBP13.72□□□□□ -0.21
ABCF1-204ENST00000468958 FAM189A1O60320 539 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 URODP06132 367 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 MCF2P10911 925 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 PFKFB1P16118 471 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 GAP43P17677 238 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 KLRC2P26717 231 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
ABCF1-204ENST00000468958 TNFSF9P41273 254 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 CLCNKBP51801 687 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 ZBTB41Q5SVQ8 909 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 DYMQ7RTS9 669 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 FSIP1Q8NA03 581 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 CCDC47Q96A33 483 aaKnown RBP13.72□□□□□ -0.21
ABCF1-204ENST00000468958 RPGRIP1Q96KN7 1286 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 PANK2Q9BZ23 570 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 ADAM7Q9H2U9 754 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 ANKFY1Q9P2R3 1169 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 KMT2EQ8IZD2 1858 aa13.72□□□□□ -0.21
ABCF1-204ENST00000468958 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 I3L4J1 428 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 K7ENM7 598 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 ADAM12O43184 909 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 TADA2AO75478 443 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 TOM1L1O75674 476 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 SPATA31D3P0C874 917 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 SRGAP2BP0DMP2 458 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 HOXB8P17481 243 aaPredicted RBP13.71□□□□□ -0.21
ABCF1-204ENST00000468958 BRCC3P46736 316 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 MCL1Q07820 350 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 STRN3Q13033 797 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 UPP1Q16831 310 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 ZC2HC1CQ53FD0 456 aaPredicted RBP13.71□□□□□ -0.21
ABCF1-204ENST00000468958 TMC5Q6UXY8 1006 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 ZPBP2Q6X784 338 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 SPATA31D4Q6ZUB0 917 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 STXBP4Q6ZWJ1 553 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 CCDC65Q8IXS2 484 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 MYCT1Q8N699 235 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
ABCF1-204ENST00000468958 C18orf25Q96B23 403 aaPredicted RBP13.71□□□□□ -0.21
ABCF1-204ENST00000468958 DNAJC19Q96DA6 116 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 FGFBP2Q9BYJ0 223 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 KBTBD4Q9NVX7 518 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 TBX20Q9UMR3 447 aa13.71□□□□□ -0.21
ABCF1-204ENST00000468958 SCN1AP35498 2009 aa13.71□□□□□ -0.22
ABCF1-204ENST00000468958 ANKRD63C9JTQ0 380 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 TRAK2O60296 914 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 PIGRP01833 764 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 SPAG1Q07617 926 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 ALCAMQ13740 583 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 BMS1Q14692 1282 aaKnown RBP13.7□□□□□ -0.22
ABCF1-204ENST00000468958 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.22
ABCF1-204ENST00000468958 E2F4Q16254 413 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 USP41Q3LFD5 358 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 KIAA1841Q6NSI8 718 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 RSPO2Q6UXX9 243 aaPredicted RBP13.7□□□□□ -0.22
ABCF1-204ENST00000468958 SFR1Q86XK3 245 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 PALB2Q86YC2 1186 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 LNX1Q8TBB1 728 aaPredicted RBP13.7□□□□□ -0.22
ABCF1-204ENST00000468958 DDX12PQ92771 950 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 ACAP3Q96P50 834 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 TCHPQ9BT92 498 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
ABCF1-204ENST00000468958 EMILIN2Q9BXX0 1053 aa13.7□□□□□ -0.22
ABCF1-204ENST00000468958 ZHX3Q9H4I2 956 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms