RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 MRPL4Q9BYD3 311 aaKnown RBP26.87■■□□□ 1.89
PTCH1-210ENST00000468211 FBXL21Q9UKT6 434 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 ST18O60284 1047 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 C8AP07357 584 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 CFHP08603 1231 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 PROZP22891 400 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 TKTP29401 623 aaKnown RBP26.86■■□□□ 1.89
PTCH1-210ENST00000468211 OR1D2P34982 312 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 HYIQ5T013 277 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 ZBTB45Q96K62 511 aaPredicted RBP26.86■■□□□ 1.89
PTCH1-210ENST00000468211 CCDC94Q9BW85 323 aaPredicted RBP26.86■■□□□ 1.89
PTCH1-210ENST00000468211 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.86■■□□□ 1.89
PTCH1-210ENST00000468211 MTRRQ9UBK8 725 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 KIF3AQ9Y496 699 aa26.86■■□□□ 1.89
PTCH1-210ENST00000468211 GUCY2CP25092 1073 aa26.85■■□□□ 1.89
PTCH1-210ENST00000468211 RAB33AQ14088 237 aa26.85■■□□□ 1.89
PTCH1-210ENST00000468211 APBB1IPQ7Z5R6 666 aaPredicted RBP26.85■■□□□ 1.89
PTCH1-210ENST00000468211 KRBA1A5PL33 1030 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 VWA3AA6NCI4 1184 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 ANHXE9PGG2 379 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 CCL16O15467 120 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 HNRNPA1P09651 372 aaKnown RBP eCLIP26.84■■□□□ 1.89
PTCH1-210ENST00000468211 FSHRP23945 695 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 HTR4Q13639 388 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 PPM1LQ5SGD2 360 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 LIN9Q5TKA1 542 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 PDXDC1Q6P996 788 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 DDX27Q96GQ7 796 aaKnown RBP26.84■■□□□ 1.89
PTCH1-210ENST00000468211 SNX27Q96L92 541 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 UROC1Q96N76 676 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 NTPCRQ9BSD7 190 aaKnown RBP26.84■■□□□ 1.89
PTCH1-210ENST00000468211 RBM19Q9Y4C8 960 aaKnown RBP26.84■■□□□ 1.89
PTCH1-210ENST00000468211 CDY1Q9Y6F8 540 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 DMDP11532 3685 aa26.84■■□□□ 1.89
PTCH1-210ENST00000468211 MCF2P10911 925 aa26.83■■□□□ 1.89
PTCH1-210ENST00000468211 HARSP12081 509 aaKnown RBP26.83■■□□□ 1.89
PTCH1-210ENST00000468211 AOC1P19801 751 aa26.83■■□□□ 1.89
PTCH1-210ENST00000468211 YARSP54577 528 aaKnown RBP26.83■■□□□ 1.89
PTCH1-210ENST00000468211 AXDND1Q5T1B0 1012 aaPredicted RBP26.83■■□□□ 1.89
PTCH1-210ENST00000468211 SYT2Q8N9I0 419 aaPredicted RBP26.83■■□□□ 1.89
PTCH1-210ENST00000468211 SLC7A14Q8TBB6 771 aa26.83■■□□□ 1.89
PTCH1-210ENST00000468211 TCHPQ9BT92 498 aa26.83■■□□□ 1.89
PTCH1-210ENST00000468211 RPP25Q9BUL9 199 aaKnown RBP26.83■■□□□ 1.89
PTCH1-210ENST00000468211 IRF2BPLQ9H1B7 796 aa26.83■■□□□ 1.89
PTCH1-210ENST00000468211 C17orf75Q9HAS0 396 aa26.83■■□□□ 1.89
PTCH1-210ENST00000468211 TOPORSQ9NS56 1045 aaPredicted RBP26.83■■□□□ 1.89
PTCH1-210ENST00000468211 WNT16Q9UBV4 365 aa26.83■■□□□ 1.89
PTCH1-210ENST00000468211 DAXXQ9UER7 740 aaPredicted RBP26.83■■□□□ 1.89
PTCH1-210ENST00000468211 NPHP3-ACAD11A0A0J9YXS1 232 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 SLC12A3P55017 1021 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 SEZ6Q53EL9 994 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 MPZL3Q6UWV2 235 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 TMEM161BQ8NDZ6 487 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 SPIRE2Q8WWL2 714 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 C18orf25Q96B23 403 aaPredicted RBP26.82■■□□□ 1.88
PTCH1-210ENST00000468211 ACAP3Q96P50 834 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 HCFC1R1Q9NWW0 138 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 CA14Q9ULX7 337 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 POLIQ9UNA4 740 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 NUMBLQ9Y6R0 609 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 VPS13AQ96RL7 3174 aa26.82■■□□□ 1.88
PTCH1-210ENST00000468211 H3BQV1 296 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 SRFP11831 508 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 PLS3P13797 630 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 KCNE1P15382 129 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 HOXA9P31269 272 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 CACNB1Q02641 598 aaPredicted RBP26.81■■□□□ 1.88
PTCH1-210ENST00000468211 TMEM119Q4V9L6 283 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 TMEM130Q8N3G9 435 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 ITFG1Q8TB96 612 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 GPR152Q8TDT2 470 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 LRRC15Q8TF66 581 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 NXPE3Q969Y0 559 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 TIPINQ9BVW5 301 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 BACE2Q9Y5Z0 518 aa26.81■■□□□ 1.88
PTCH1-210ENST00000468211 PODXLO00592 558 aa26.8■■□□□ 1.88
PTCH1-210ENST00000468211 PLA2G4BP0C869 781 aa26.8■■□□□ 1.88
PTCH1-210ENST00000468211 MAPTP10636 758 aaKnown RBP26.8■■□□□ 1.88
PTCH1-210ENST00000468211 ARSHQ5FYA8 562 aa26.8■■□□□ 1.88
PTCH1-210ENST00000468211 PARM1Q6UWI2 310 aa26.8■■□□□ 1.88
PTCH1-210ENST00000468211 FGF14Q92915 247 aa26.8■■□□□ 1.88
PTCH1-210ENST00000468211 HAPLN2Q9GZV7 340 aa26.8■■□□□ 1.88
PTCH1-210ENST00000468211 CNTN3Q9P232 1028 aa26.8■■□□□ 1.88
PTCH1-210ENST00000468211 COL4A3Q01955 1670 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 TRAPPC3O43617 180 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 GFRA3O60609 400 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 SLC10A6Q3KNW5 377 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 ARL6IP4Q66PJ3 421 aaKnown RBP26.79■■□□□ 1.88
PTCH1-210ENST00000468211 ANKS3Q6ZW76 656 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 FGF13Q92913 245 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 SLC38A7Q9NVC3 462 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 ANKFY1Q9P2R3 1169 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 DNMT3BQ9UBC3 853 aaKnown RBP26.79■■□□□ 1.88
PTCH1-210ENST00000468211 CDH7Q9ULB5 785 aa26.79■■□□□ 1.88
PTCH1-210ENST00000468211 UVSSAQ2YD98 709 aa26.78■■□□□ 1.88
PTCH1-210ENST00000468211 VARS2Q5ST30 1063 aaKnown RBP26.78■■□□□ 1.88
PTCH1-210ENST00000468211 CCDC105Q8IYK2 499 aa26.78■■□□□ 1.88
PTCH1-210ENST00000468211 CFAP54Q96N23 3096 aa26.77■■□□□ 1.88
PTCH1-210ENST00000468211 PROB1E7EW31 1015 aa26.77■■□□□ 1.88
PTCH1-210ENST00000468211 XYLBO75191 536 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms