RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 C2CD2Q9Y426 696 aa18.52■□□□□ 0.56
VARS2-204ENST00000467717 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.52■□□□□ 0.56
VARS2-204ENST00000467717 MICAL3Q7RTP6 2002 aa18.52■□□□□ 0.55
VARS2-204ENST00000467717 IKBKBO14920 756 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 DLATP10515 647 aaKnown RBP18.51■□□□□ 0.55
VARS2-204ENST00000467717 RABGGTBP53611 331 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 WNT7BP56706 349 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 RNASELQ05823 741 aaKnown RBP18.51■□□□□ 0.55
VARS2-204ENST00000467717 SPAG1Q07617 926 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 CCDC40Q4G0X9 1142 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 JADE1Q6IE81 842 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 GPR153Q6NV75 609 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 DEFB123Q8N688 67 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 SP7Q8TDD2 431 aaPredicted RBP18.51■□□□□ 0.55
VARS2-204ENST00000467717 TMC2Q8TDI7 906 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 PARD3BQ8TEW8 1205 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 KIF12Q96FN5 646 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 PPP1R10Q96QC0 940 aaKnown RBP18.51■□□□□ 0.55
VARS2-204ENST00000467717 ARMCX3Q9UH62 379 aaPredicted RBP18.51■□□□□ 0.55
VARS2-204ENST00000467717 UBQLN1Q9UMX0 589 aaKnown RBP18.51■□□□□ 0.55
VARS2-204ENST00000467717 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 STXBP5LQ9Y2K9 1186 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 PCDHA11Q9Y5I1 949 aa18.51■□□□□ 0.55
VARS2-204ENST00000467717 SMTNL1A8MU46 457 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 XPOTO43592 962 aaKnown RBP18.5■□□□□ 0.55
VARS2-204ENST00000467717 NFICP08651 508 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 CYP3A5P20815 502 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 VAMP7P51809 220 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 MARSP56192 900 aaKnown RBP18.5■□□□□ 0.55
VARS2-204ENST00000467717 MCCD1P59942 119 aaPredicted RBP18.5■□□□□ 0.55
VARS2-204ENST00000467717 BFSP1Q12934 665 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 TMEM132DQ14C87 1099 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 NCAPHQ15003 741 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 NAB2Q15742 525 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 RAB30Q15771 203 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 ZBTB6Q15916 424 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 WDR49Q8IV35 697 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 FAM114A1Q8IWE2 563 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 EFCAB13Q8IY85 973 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 FIBCD1Q8N539 461 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 AOPEPQ8N6M6 819 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 FAM200AQ8TCP9 573 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 PLEKHO2Q8TD55 490 aa18.5■□□□□ 0.55
VARS2-204ENST00000467717 FAM193BQ96PV7 902 aaPredicted RBP18.5■□□□□ 0.55
VARS2-204ENST00000467717 LRRIQ3A6PVS8 624 aaPredicted RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 BECN2A8MW95 431 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 TNNI1P19237 187 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 CLDN10P78369 228 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 TFAMQ00059 246 aaKnown RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 DSC1Q08554 894 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 IQCB1Q15051 598 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 DUOXA2Q1HG44 320 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 ZNF280BQ86YH2 543 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 IRF2BP1Q8IU81 584 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 DHX40Q8IX18 779 aaKnown RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 BEST2Q8NFU1 509 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 CACTINQ8WUQ7 758 aaKnown RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 CNOT6LQ96LI5 555 aaKnown RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 POP1Q99575 1024 aaKnown RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 CGRRF1Q99675 332 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 PBX4Q9BYU1 374 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 CBX8Q9HC52 389 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 SAMSN1Q9NSI8 373 aaKnown RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 INTS13Q9NVM9 706 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 FANCLQ9NW38 375 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 MAGEC2Q9UBF1 373 aaPredicted RBP18.49■□□□□ 0.55
VARS2-204ENST00000467717 MSRAQ9UJ68 235 aa18.49■□□□□ 0.55
VARS2-204ENST00000467717 LCHNA4D1U4 455 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 DDHD2O94830 711 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 AP3M2P53677 418 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 DLG4P78352 724 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 SMAD3P84022 425 aaKnown RBP18.48■□□□□ 0.55
VARS2-204ENST00000467717 TUSC3Q13454 348 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 LRIT3Q3SXY7 679 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 C18orf25Q96B23 403 aaPredicted RBP18.48■□□□□ 0.55
VARS2-204ENST00000467717 TMEM175Q9BSA9 504 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 NRDE2Q9H7Z3 1164 aa18.48■□□□□ 0.55
VARS2-204ENST00000467717 MRPL42Q9Y6G3 142 aaKnown RBP18.48■□□□□ 0.55
VARS2-204ENST00000467717 TMEM191BP0C7N4 346 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 MYOGP15173 224 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 EEF1GP26641 437 aaKnown RBP18.47■□□□□ 0.55
VARS2-204ENST00000467717 PBX2P40425 430 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 DCAF17Q5H9S7 520 aaPredicted RBP18.47■□□□□ 0.55
VARS2-204ENST00000467717 SPOUT1Q5T280 376 aaKnown RBP18.47■□□□□ 0.55
VARS2-204ENST00000467717 CDKAL1Q5VV42 579 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 LMBRD2Q68DH5 695 aaPredicted RBP18.47■□□□□ 0.55
VARS2-204ENST00000467717 Q7L0L9 218 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 CREBRFQ8IUR6 639 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 TRIM59Q8IWR1 403 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 COLGALT2Q8IYK4 626 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 OR5B17Q8NGF7 314 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 ANKRD36BP1Q96IX9 119 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 UROC1Q96N76 676 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 MTMR12Q9C0I1 747 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 CWH43Q9H720 699 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 HCSTQ9UBK5 93 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 TUBGCP4Q9UGJ1 667 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 LAMA2P24043 3122 aaKnown RBP18.47■□□□□ 0.55
VARS2-204ENST00000467717 PTPRJQ12913 1337 aa18.47■□□□□ 0.55
VARS2-204ENST00000467717 LINC01553A4QN01 128 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms