RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 ADAM28Q9UKQ2 775 aa28.29■■■□□ 2.12
PDCD4-205ENST00000467574 LACTBL1A8MY62 500 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 TGFB1I1O43294 461 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 SMC1AQ14683 1233 aaKnown RBP28.28■■■□□ 2.12
PDCD4-205ENST00000467574 CTC1Q2NKJ3 1217 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 CD300LGQ6UXG3 332 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 TAS1R1Q7RTX1 841 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 AUTS2Q8WXX7 1259 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 GPR62Q9BZJ7 368 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 SLC38A7Q9NVC3 462 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 STK39Q9UEW8 545 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 IRAK3Q9Y616 596 aa28.28■■■□□ 2.12
PDCD4-205ENST00000467574 C2orf71A6NGG8 1288 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 TMEM189-UBE2V1I3L0A0 370 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 SOD2P04179 222 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 CLCNKBP51801 687 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 PPP2R3AQ06190 1150 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 SPAG1Q07617 926 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 PTPN14Q15678 1187 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 ZBTB6Q15916 424 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 UPP1Q16831 310 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 KANK3Q6NY19 840 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 FUT10Q6P4F1 479 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 TMEM130Q8N3G9 435 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 MRPL43Q8N983 215 aaKnown RBP28.27■■■□□ 2.12
PDCD4-205ENST00000467574 C3orf58Q8NDZ4 430 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 UROC1Q96N76 676 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 THEGQ9P2T0 379 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 TUBGCP4Q9UGJ1 667 aa28.27■■■□□ 2.12
PDCD4-205ENST00000467574 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.26■■■□□ 2.11
PDCD4-205ENST00000467574 RHOBTB3O94955 611 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 NRIP1P48552 1158 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 POU5F1Q01860 360 aaKnown RBP28.26■■■□□ 2.11
PDCD4-205ENST00000467574 PSMD2Q13200 908 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 DUSP6Q16828 381 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.26■■■□□ 2.11
PDCD4-205ENST00000467574 NELFCDQ8IXH7 590 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 HASPINQ8TF76 798 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 PPP2R3CQ969Q6 453 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 PABPC5Q96DU9 382 aaKnown RBP28.26■■■□□ 2.11
PDCD4-205ENST00000467574 SAAL1Q96ER3 474 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 TIGD1Q96MW7 591 aa28.26■■■□□ 2.11
PDCD4-205ENST00000467574 UBE2ZQ9H832 354 aaPredicted RBP28.26■■■□□ 2.11
PDCD4-205ENST00000467574 PER2O15055 1255 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 LINC01565O15544 149 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 LILRB3O75022 631 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 WNT7BP56706 349 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 PNOCQ13519 176 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 ARMCX5Q6P1M9 558 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 RBM23Q86U06 439 aaKnown RBP28.25■■■□□ 2.11
PDCD4-205ENST00000467574 HLA-CQ95604 372 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 KIF12Q96FN5 646 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 TLE6Q9H808 572 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 AGPAT3Q9NRZ7 376 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 CHST7Q9NS84 486 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 COG5Q9UP83 839 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 C5orf42Q9H799 3197 aa28.25■■■□□ 2.11
PDCD4-205ENST00000467574 SF3B1O75533 1304 aaKnown RBP eCLIP28.24■■■□□ 2.117e-6■■■■■ 28.7
PDCD4-205ENST00000467574 PLXNA3P51805 1871 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.24■■■□□ 2.11
PDCD4-205ENST00000467574 GLP2RO95838 553 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 LTBRP36941 435 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 TFF2Q03403 129 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 KCNB1Q14721 858 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 CLEC17AQ6ZS10 378 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 CD302Q8IX05 232 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 EFHBQ8N7U6 833 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 VN1R2Q8NFZ6 395 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 FAM213AQ9BRX8 229 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 PCIF1Q9H4Z3 704 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 IGFLR1Q9H665 355 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 SCN1AP35498 2009 aa28.24■■■□□ 2.11
PDCD4-205ENST00000467574 PODXLO00592 558 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 EXTL3O43909 919 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 TADA2AO75478 443 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 CXCL14O95715 111 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 NFICP08651 508 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 KCNC3Q14003 757 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 KNOP1Q1ED39 458 aaKnown RBP28.23■■■□□ 2.11
PDCD4-205ENST00000467574 JADE1Q6IE81 842 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 DCLRE1AQ6PJP8 1040 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 BRSK2Q8IWQ3 736 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 DDX27Q96GQ7 796 aaKnown RBP28.23■■■□□ 2.11
PDCD4-205ENST00000467574 B3GALT6Q96L58 329 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 TSPAN18Q96SJ8 248 aa28.23■■■□□ 2.11
PDCD4-205ENST00000467574 CDCA3Q99618 268 aaPredicted RBP28.23■■■□□ 2.11
PDCD4-205ENST00000467574 GOLGA8IPA6NC78 632 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 GOLGA8JA6NMD2 632 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 NCK2O43639 380 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 TBX10O75333 385 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 B3GAT3O94766 335 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 RBM10P98175 930 aaKnown RBP28.22■■■□□ 2.11
PDCD4-205ENST00000467574 DSG1Q02413 1049 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 DLX2Q07687 328 aaPredicted RBP28.22■■■□□ 2.11
PDCD4-205ENST00000467574 ADAM15Q13444 863 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 KIAA0319Q5VV43 1072 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 FAM212AQ96EL1 285 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 CCDC34Q96HJ3 373 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 ASB7Q9H672 318 aa28.22■■■□□ 2.11
PDCD4-205ENST00000467574 CLDND1Q9NY35 253 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms