RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TTC12Q9H892 705 aaPredicted RBP17.33■□□□□ 0.36
TSSC4-208ENST00000467308 DLL3Q9NYJ7 618 aa17.33■□□□□ 0.36
TSSC4-208ENST00000467308 KCNH3Q9ULD8 1083 aa17.33■□□□□ 0.36
TSSC4-208ENST00000467308 NCOR2Q9Y618 2525 aa17.33■□□□□ 0.36
TSSC4-208ENST00000467308 FAM205CA6NFA0 338 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 CASTOR2A6NHX0 329 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 LRRIQ4A6NIV6 560 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 PTGESO14684 152 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 N4BP3O15049 544 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 SPTLC1O15269 473 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 LRRN2O75325 713 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 NR5A1Q13285 461 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 SLC44A4Q53GD3 710 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 MCPH1Q8NEM0 835 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 PIGOQ8TEQ8 1089 aa17.32■□□□□ 0.36
TSSC4-208ENST00000467308 CCL16O15467 120 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 LAMTOR5O43504 91 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 NEMFO60524 1076 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 USO1O60763 962 aaKnown RBP17.31■□□□□ 0.36
TSSC4-208ENST00000467308 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
TSSC4-208ENST00000467308 RAB33AQ14088 237 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 NAB2Q15742 525 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 AXDND1Q5T1B0 1012 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-208ENST00000467308 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-208ENST00000467308 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-208ENST00000467308 ZBTB8OSQ8IWT0 167 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 DCLK2Q8N568 766 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 ITFG1Q8TB96 612 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 SLC7A14Q8TBB6 771 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-208ENST00000467308 C2orf40Q9H1Z8 148 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 PDZD7Q9H5P4 517 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 GPRC5CQ9NQ84 441 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 SPATA6Q9NWH7 488 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-208ENST00000467308 POLIQ9UNA4 740 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 PCDHGA2Q9Y5H1 932 aa17.31■□□□□ 0.36
TSSC4-208ENST00000467308 FAM170BA6NMN3 283 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 ADAM12O43184 909 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 RECQL4O94761 1208 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 TXKP42681 527 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 PABPC1LQ4VXU2 614 aaKnown RBP17.3■□□□□ 0.36
TSSC4-208ENST00000467308 NPAS3Q8IXF0 933 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 ZNF396Q96N95 335 aaPredicted RBP17.3■□□□□ 0.36
TSSC4-208ENST00000467308 MTMR9Q96QG7 549 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 NELL2Q99435 816 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 ADPGKQ9BRR6 497 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 SNTG2Q9NY99 539 aa17.3■□□□□ 0.36
TSSC4-208ENST00000467308 MTF2Q9Y483 593 aaPredicted RBP17.3■□□□□ 0.36
TSSC4-208ENST00000467308 TMEM189-UBE2V1I3L0A0 370 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 FGFR3P22607 806 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 OR1D2P34982 312 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
TSSC4-208ENST00000467308 UBXN2BQ14CS0 331 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 MAPK6Q16659 721 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 VARS2Q5ST30 1063 aaKnown RBP17.29■□□□□ 0.36
TSSC4-208ENST00000467308 ZBTB41Q5SVQ8 909 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 MAEAQ7L5Y9 396 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
TSSC4-208ENST00000467308 CLDN23Q96B33 292 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 KXD1Q9BQD3 176 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 LTB4R2Q9NPC1 389 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 MTRRQ9UBK8 725 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
TSSC4-208ENST00000467308 COL4A3Q01955 1670 aa17.29■□□□□ 0.36
TSSC4-208ENST00000467308 TRIP11Q15643 1979 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 TPRP12270 2363 aaKnown RBP17.28■□□□□ 0.36
TSSC4-208ENST00000467308 TTLL13PA6NNM8 815 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 ACKR2O00590 384 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 ECI2O75521 394 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 KRT85P78386 507 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 ZBTB44Q8NCP5 570 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 ATRIPQ8WXE1 791 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 NELL1Q92832 810 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
TSSC4-208ENST00000467308 CCDC113Q9H0I3 377 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 CXCL16Q9H2A7 254 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 HCFC1R1Q9NWW0 138 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 GDE1Q9NZC3 331 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 DNMT3BQ9UBC3 853 aaKnown RBP17.28■□□□□ 0.36
TSSC4-208ENST00000467308 BACE2Q9Y5Z0 518 aa17.28■□□□□ 0.36
TSSC4-208ENST00000467308 CACNA1BQ00975 2339 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 F5P12259 2224 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 A0A087WWV3 80 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 NCAM2O15394 837 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 B3GAT3O94766 335 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 SDHBP21912 280 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 RPS9P46781 194 aaKnown RBP17.27■□□□□ 0.36
TSSC4-208ENST00000467308 CSTF1Q05048 431 aaKnown RBP17.27■□□□□ 0.36
TSSC4-208ENST00000467308 DNM1Q05193 864 aaKnown RBP17.27■□□□□ 0.36
TSSC4-208ENST00000467308 TMEM132AQ24JP5 1023 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 RSPO4Q2I0M5 234 aaPredicted RBP17.27■□□□□ 0.36
TSSC4-208ENST00000467308 DCAF4L1Q3SXM0 396 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
TSSC4-208ENST00000467308 NACC1Q96RE7 527 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms