RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 SRPK3Q9UPE1 567 aa14.17□□□□□ -0.14
UBR4-210ENST00000466969 ATG2BQ96BY7 2078 aa14.17□□□□□ -0.14
UBR4-210ENST00000466969 VWA8A3KMH1 1905 aa14.17□□□□□ -0.14
UBR4-210ENST00000466969 ERVH48-1M5A8F1 160 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 PI4KAP42356 2102 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 DPP6P42658 865 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 SPIRE1Q08AE8 756 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 FCHO2Q0JRZ9 810 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 UBE2SQ16763 222 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 CEP55Q53EZ4 464 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 TMPRSS7Q7RTY8 843 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 ZNF410Q86VK4 478 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 SPIRE2Q8WWL2 714 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 CAMK1GQ96NX5 476 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 SLITRK6Q9H5Y7 841 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 NRBP2Q9NSY0 501 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 NXF1Q9UBU9 619 aaKnown RBP14.16□□□□□ -0.14
UBR4-210ENST00000466969 DOPEY2Q9Y3R5 2298 aa14.16□□□□□ -0.14
UBR4-210ENST00000466969 NCANO14594 1321 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 PTPRBP23467 1997 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 SH3BP5O60239 455 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 RNF40O75150 1001 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 PSAPP07602 524 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 CD59P13987 128 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 ELF1P32519 619 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 DNM2P50570 870 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 GFPT1Q06210 699 aaPredicted RBP14.15□□□□□ -0.14
UBR4-210ENST00000466969 PTPAQ15257 358 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 MCMDC2Q4G0Z9 681 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 PCSK4Q6UW60 755 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 RABGGTAQ92696 567 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 RRP36Q96EU6 259 aaKnown RBP14.15□□□□□ -0.14
UBR4-210ENST00000466969 MIOSQ9NXC5 875 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 GABBR1Q9UBS5 961 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
UBR4-210ENST00000466969 DNMT3LQ9UJW3 386 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 TDRD15B5MCY1 1934 aaKnown RBP14.15□□□□□ -0.14
UBR4-210ENST00000466969 NOTCH2Q04721 2471 aa14.15□□□□□ -0.14
UBR4-210ENST00000466969 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.15
UBR4-210ENST00000466969 ATMQ13315 3056 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 GOLGA4Q13439 2230 aaKnown RBP14.14□□□□□ -0.15
UBR4-210ENST00000466969 TNFRSF10BO14763 440 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 RRP8O43159 456 aaKnown RBP14.14□□□□□ -0.15
UBR4-210ENST00000466969 BCKDHBP21953 392 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 CCR2P41597 374 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 DRP2Q13474 957 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 HSP90AA2PQ14568 343 aaPredicted RBP14.14□□□□□ -0.15
UBR4-210ENST00000466969 ARHGAP29Q52LW3 1261 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 LPCAT2Q7L5N7 544 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 SYT13Q7L8C5 426 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 RHPN2Q8IUC4 686 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 MINDY1Q8N5J2 469 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 HASPINQ8TF76 798 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 ZFP42Q96MM3 310 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 TPSD1Q9BZJ3 242 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 GPR88Q9GZN0 384 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 SLC6A14Q9UN76 642 aa14.14□□□□□ -0.15
UBR4-210ENST00000466969 CREBBPQ92793 2442 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 GON4LQ3T8J9 2241 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 PRRG1O14668 218 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 SLC14A1Q13336 389 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 DMC1Q14565 340 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 TMEM196Q5HYL7 178 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 UBXN11Q5T124 520 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 IQCEQ6IPM2 695 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 ARMCX6Q7L4S7 300 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 SLCO6A1Q86UG4 719 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 ELMOD1Q8N336 334 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 GALNT15Q8N3T1 639 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 PDCD7Q8N8D1 485 aaKnown RBP14.13□□□□□ -0.15
UBR4-210ENST00000466969 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 NLRP4Q96MN2 994 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 KRT23Q9C075 422 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 FSCN3Q9NQT6 498 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 TMEM74BQ9NUR3 256 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 SNTG2Q9NY99 539 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 KIAA1522Q9P206 1035 aaPredicted RBP14.13□□□□□ -0.15
UBR4-210ENST00000466969 SAMM50Q9Y512 469 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 IPPQ9Y573 584 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 PCDHA10Q9Y5I2 948 aa14.13□□□□□ -0.15
UBR4-210ENST00000466969 ARHGEF37A1IGU5 675 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 DPYSL4O14531 572 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 OATP04181 439 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 ZNF76P36508 570 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 EIF2S3P41091 472 aaKnown RBP14.12□□□□□ -0.15
UBR4-210ENST00000466969 ELAVL2Q12926 359 aaKnown RBP14.12□□□□□ -0.15
UBR4-210ENST00000466969 FSTL4Q6MZW2 842 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 SMAP1Q8IYB5 467 aaPredicted RBP14.12□□□□□ -0.15
UBR4-210ENST00000466969 SMG8Q8ND04 991 aaKnown RBP14.12□□□□□ -0.15
UBR4-210ENST00000466969 TSTD1Q8NFU3 115 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 CEP76Q8TAP6 659 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 PI4K2BQ8TCG2 481 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 ACDQ96AP0 544 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 IL17BQ9UHF5 180 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 CDY1Q9Y6F8 540 aa14.12□□□□□ -0.15
UBR4-210ENST00000466969 MEIS1O00470 390 aa14.11□□□□□ -0.15
UBR4-210ENST00000466969 MYL4P12829 197 aa14.11□□□□□ -0.15
UBR4-210ENST00000466969 C6P13671 934 aa14.11□□□□□ -0.15
UBR4-210ENST00000466969 GJA1P17302 382 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms