RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 FUT2Q10981 343 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 ELAVL2Q12926 359 aaKnown RBP16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 WDR44Q5JSH3 913 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 LRCH2Q5VUJ6 765 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 ANO5Q75V66 913 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 MIER3Q7Z3K6 550 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 PRPF31Q8WWY3 499 aaKnown RBP16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 SLC7A3Q8WY07 619 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 SLC5A5Q92911 643 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 SMARCD2Q92925 531 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 TRIM6Q9C030 488 aaPredicted RBP16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 C8orf33Q9H7E9 229 aaPredicted RBP16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 RBM28Q9NW13 759 aaKnown RBP16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 MSRB2Q9Y3D2 182 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 PDCD11Q14690 1871 aaKnown RBP16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 WDR27A2RRH5 827 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 ZNF197O14709 1029 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 LAMTOR4Q0VGL1 99 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 TUSC3Q13454 348 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 PLA2G4FQ68DD2 849 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 PDZD3Q86UT5 571 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 REXO1Q8N1G1 1221 aaKnown RBP16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 CSGALNACT1Q8TDX6 532 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 TCEAL4Q96EI5 215 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 MTRRQ9UBK8 725 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 GPSM3Q9Y4H4 160 aa16.36■□□□□ 0.21
HMGXB4-206ENST00000466438 VWA8A3KMH1 1905 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 ESYT2A0FGR8 921 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 ARHGEF37A1IGU5 675 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 LRG1P02750 347 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 AKAP5P24588 427 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 SPIRE1Q08AE8 756 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 NCBP1Q09161 790 aaKnown RBP16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 KIAA1211LQ6NV74 962 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 MFSD6LQ8IWD5 586 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 SYNPOQ8N3V7 929 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 RNF149Q8NC42 400 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 RUFY2Q8WXA3 655 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 TMEM143Q96AN5 459 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 CORO1BQ9BR76 489 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 TRPV4Q9HBA0 871 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 CDY1Q9Y6F8 540 aa16.35■□□□□ 0.21
HMGXB4-206ENST00000466438 LNP1A1A4G5 178 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 CASTOR2A6NHX0 329 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 SLC38A8A6NNN8 435 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 HYAL3O43820 417 aaPredicted RBP16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 VIPR2P41587 438 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 PXNP49023 591 aaPredicted RBP16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 CCINQ13939 588 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 PLK5Q496M5 336 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 PDZD4Q76G19 769 aaPredicted RBP16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 PROSER1Q86XN7 944 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 EXOC8Q8IYI6 725 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 DHX33Q9H6R0 707 aaKnown RBP16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 KLK14Q9P0G3 267 aa16.34■□□□□ 0.21
HMGXB4-206ENST00000466438 MYBPHLA2RUH7 354 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 SPECC1L-ADORA2AF8WAN1 911 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 ASAP2O43150 1006 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 EXTL3O43909 919 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 PSMD10O75832 226 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 CTHP32929 405 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 CCR2P41597 374 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 SOX9P48436 509 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 TXNDC11Q6PKC3 985 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 B3GNT9Q6UX72 402 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 RALGPS2Q86X27 583 aaPredicted RBP16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 GJA10Q969M2 543 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 ZSWIM3Q96MP5 696 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 C6orf50Q9HD87 102 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 TMEM9BQ9NQ34 198 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 KLK13Q9UKR3 277 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 PPME1Q9Y570 386 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 NCANO14594 1321 aa16.33■□□□□ 0.2
HMGXB4-206ENST00000466438 HEPACAM2A8MVW5 462 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 CHADO15335 359 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 CAVIN2O95810 425 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 FGFR3P22607 806 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 RFC5P40937 340 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 NPEPPSP55786 919 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 PSMC5P62195 406 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 CREB5Q02930 508 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 ELF2Q15723 593 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 RTN1Q16799 776 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 APOA5Q6Q788 366 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 C19orf48Q6RUI8 117 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 YAF2Q8IY57 180 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 ZSCAN18Q8TBC5 510 aaPredicted RBP16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 TCP11Q8WWU5 503 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 E2F7Q96AV8 911 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms