RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RNASE9P60153 205 aaKnown RBP19.64■□□□□ 0.73
COL9A3-205ENST00000466192 PRAMEF19Q5SWL8 479 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 SPOPLQ6IQ16 392 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 CCDC70Q6NSX1 233 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 DAAM2Q86T65 1068 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 SAPCD2Q86UD0 394 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 SLC35G2Q8TBE7 412 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 ARHGEF26Q96DR7 871 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 THAP2Q9H0W7 228 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 RNF14Q9UBS8 474 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 COL1A2P08123 1366 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 KCNK3O14649 394 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 MAGEB2O15479 319 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 CYP11B1P15538 503 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 MAP2K5Q13163 448 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 WDR44Q5JSH3 913 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 ATF7IP2Q5U623 682 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 SCARA3Q6AZY7 606 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 ENOSF1Q7L5Y1 443 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 MSL3Q8N5Y2 521 aaKnown RBP19.63■□□□□ 0.73
COL9A3-205ENST00000466192 HDAC7Q8WUI4 952 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 TAF4BQ92750 862 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 NFKBIZQ9BYH8 718 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 ISCUQ9H1K1 167 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 SLC5A4Q9NY91 659 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 ANKRD62A6NC57 917 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 MAP2K7O14733 419 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 KIF4AO95239 1232 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 MMEP08473 750 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 MCM3P25205 808 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 FMO1Q01740 532 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 EEF1DP3Q658K8 133 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 MPZL3Q6UWV2 235 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 HDXQ7Z353 690 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 CDR2LQ86X02 465 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-205ENST00000466192 LMBR1Q8WVP7 490 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 RFFLQ8WZ73 363 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 PPP1R16BQ96T49 567 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 ZCCHC17Q9NP64 241 aaKnown RBP19.63■□□□□ 0.73
COL9A3-205ENST00000466192 FLRT1Q9NZU1 646 aa19.63■□□□□ 0.73
COL9A3-205ENST00000466192 CPSF3Q9UKF6 684 aaKnown RBP19.63■□□□□ 0.73
COL9A3-205ENST00000466192 CSDE1O75534 798 aaKnown RBP19.62■□□□□ 0.73
COL9A3-205ENST00000466192 FTLP02792 175 aaPredicted RBP19.62■□□□□ 0.73
COL9A3-205ENST00000466192 TNFAIP2Q03169 654 aa19.62■□□□□ 0.73
COL9A3-205ENST00000466192 RGMBQ6NW40 437 aa19.62■□□□□ 0.73
COL9A3-205ENST00000466192 MTHFD1LQ6UB35 978 aa19.62■□□□□ 0.73
COL9A3-205ENST00000466192 PEX26Q7Z412 305 aa19.62■□□□□ 0.73
COL9A3-205ENST00000466192 SLFN11Q7Z7L1 901 aa19.62■□□□□ 0.73
COL9A3-205ENST00000466192 APOBEC3GQ9HC16 384 aaKnown RBP19.62■□□□□ 0.73
COL9A3-205ENST00000466192 A0A087WZ62 844 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 VTNP04004 478 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 KRT5P13647 590 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 SLC7A5Q01650 507 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 DGKDQ16760 1214 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 ZNF568Q3ZCX4 644 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 DDX1Q92499 740 aaKnown RBP19.61■□□□□ 0.73
COL9A3-205ENST00000466192 FAM81BQ96LP2 452 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 FDXACB1Q9BRP7 624 aaPredicted RBP19.61■□□□□ 0.73
COL9A3-205ENST00000466192 AKT3Q9Y243 479 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 CENPFP49454 3210 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 CALCAP01258 141 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 PHKA2P46019 1235 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 PDE6CP51160 858 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 CDR2Q01850 454 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 POU5F1BQ06416 359 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 PPFIA1Q13136 1202 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 GRM1Q13255 1194 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 MARCH8Q5T0T0 291 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 C17orf99Q6UX52 265 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 IFNL1Q8IU54 200 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 WDR49Q8IV35 697 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 THNSL1Q8IYQ7 743 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 CEP120Q8N960 986 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 ZBTB9Q96C00 473 aa19.61■□□□□ 0.73
COL9A3-205ENST00000466192 DMGDHQ9UI17 866 aaKnown RBP19.61■□□□□ 0.73
COL9A3-205ENST00000466192 BUB1BO60566 1050 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-205ENST00000466192 RTN2O75298 545 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 GRIK4Q16099 956 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 GSPT2Q8IYD1 628 aaKnown RBP19.6■□□□□ 0.73
COL9A3-205ENST00000466192 SYCE1Q8N0S2 351 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 FAM212AQ96EL1 285 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 PRMT7Q9NVM4 692 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-205ENST00000466192 COG5Q9UP83 839 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 TNFSF13BQ9Y275 285 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 HOXC6P09630 235 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 MYBL2P10244 700 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 GZMAP12544 262 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 NCOA4Q13772 614 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 SMC1AQ14683 1233 aaKnown RBP19.6■□□□□ 0.73
COL9A3-205ENST00000466192 CASP8Q14790 479 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 CCL14Q16627 93 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 AMHR2Q16671 573 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 TMEM132AQ24JP5 1023 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 NT5DC3Q86UY8 548 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 IFNLR1Q8IU57 520 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-205ENST00000466192 CDT1Q9H211 546 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 GNEQ9Y223 722 aaKnown RBP19.6■□□□□ 0.73
COL9A3-205ENST00000466192 STXBP5LQ9Y2K9 1186 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 NUB1Q9Y5A7 615 aa19.6■□□□□ 0.73
COL9A3-205ENST00000466192 DYNC1LI2O43237 492 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms