RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 RPS6KC1Q96S38 1066 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 DDX23Q9BUQ8 820 aaKnown RBP17.47■□□□□ 0.39
SLX4-202ENST00000466154 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 A6NNZ2 444 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 PI4K2BG5E9Z4 385 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 CLEC16AQ2KHT3 1053 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 TUBB8Q3ZCM7 444 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 MIS18BP1Q6P0N0 1132 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 CDR2LQ86X02 465 aaPredicted RBP17.47■□□□□ 0.39
SLX4-202ENST00000466154 CABS1Q96KC9 395 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 TIPINQ9BVW5 301 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 CYP39A1Q9NYL5 469 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 PTPRJQ12913 1337 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 GOLGA6L7A0A1B0GV03 622 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 NFKBIEO00221 500 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 THAP12O43422 761 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 WDR78Q5VTH9 848 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 TDRD10Q5VZ19 366 aaKnown RBP17.47■□□□□ 0.39
SLX4-202ENST00000466154 DCAF15Q66K64 600 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 TEX2Q8IWB9 1127 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 ACSF2Q96CM8 615 aaPredicted RBP17.47■□□□□ 0.39
SLX4-202ENST00000466154 GPRASP2Q96D09 838 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 PAGR1Q9BTK6 254 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 ST6GALNAC4Q9H4F1 302 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 ACAD9Q9H845 621 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
SLX4-202ENST00000466154 PCDHA3Q9Y5H8 950 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 UMODL1Q5DID0 1318 aa17.47■□□□□ 0.39
SLX4-202ENST00000466154 FAM107AO95990 144 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 CYP1A2P05177 515 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 CDR1P51861 262 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 MAP3K10Q02779 954 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 LRRC14Q15048 493 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 POTEAQ6S8J7 498 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 SCARA5Q6ZMJ2 495 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 GSTA5Q7RTV2 222 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 EIF1ADQ8N9N8 165 aaKnown RBP17.46■□□□□ 0.39
SLX4-202ENST00000466154 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 MFSD14AQ96MC6 490 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 TBK1Q9UHD2 729 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 SRGAP2CP0DJJ0 459 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 CHN1P15882 459 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
SLX4-202ENST00000466154 ADCY8P40145 1251 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 HP1BP3Q5SSJ5 553 aaPredicted RBP17.46■□□□□ 0.39
SLX4-202ENST00000466154 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 MICALCLQ6ZW33 695 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 SLC17A8Q8NDX2 589 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 SLC7A3Q8WY07 619 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 DDX1Q92499 740 aaKnown RBP17.46■□□□□ 0.39
SLX4-202ENST00000466154 TEX13BQ9BXU2 312 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 ZNF302Q9NR11 478 aa17.46■□□□□ 0.39
SLX4-202ENST00000466154 KIF13BQ9NQT8 1826 aa17.46■□□□□ 0.38
SLX4-202ENST00000466154 PODXLO00592 558 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 HGSO14964 777 aaPredicted RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 CAPN12Q6ZSI9 719 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 DHX37Q8IY37 1157 aaKnown RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 HAUS1Q96CS2 278 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 PLVAPQ9BX97 442 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 ADAM22Q9P0K1 906 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 UVRAGQ9P2Y5 699 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 SLC12A6Q9UHW9 1150 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 RBBP6Q7Z6E9 1792 aaKnown RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 CTNNA2P26232 953 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 GNA15P30679 374 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 MCOLN2Q8IZK6 566 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 TAB3Q8N5C8 712 aaPredicted RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 TMC2Q8TDI7 906 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 DYDC1Q8WWB3 177 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 SEC14L1Q92503 715 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 MRRFQ96E11 262 aaKnown RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 HERPUD2Q9BSE4 406 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 R3HDM2Q9Y2K5 976 aaKnown RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 ZNF646O15015 1829 aaPredicted RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 ATP8B3O60423 1300 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 GSTTP1A0A1W2PQM5 241 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 MEFVO15553 781 aaPredicted RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 VIMP08670 466 aaKnown RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 ATF7P17544 494 aaPredicted RBP17.45■□□□□ 0.38
SLX4-202ENST00000466154 DSG3P32926 999 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 OR5B17Q8NGF7 314 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 EPB41L4BQ9H329 900 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 GGA3Q9NZ52 723 aa17.45■□□□□ 0.38
SLX4-202ENST00000466154 RALAP11233 206 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 HSPA6P17066 643 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 DRP2Q13474 957 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 ATP13A4Q4VNC1 1196 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 AGBL2Q5U5Z8 902 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 NCAPG2Q86XI2 1143 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 ANKRD42Q8N9B4 389 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 SPIRE2Q8WWL2 714 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 CD101Q93033 1021 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 PPP1R16BQ96T49 567 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 RASGRF2O14827 1237 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 EXTL3O43909 919 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 CHKAP35790 457 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms