RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 GLIS3Q8NEA6 775 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 HPS3Q969F9 1004 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 UROC1Q96N76 676 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 ZMAT2Q96NC0 199 aaKnown RBP14.07□□□□□ -0.16
COL5A1-206ENST00000465877 ACCSQ96QU6 501 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 SLC38A7Q9NVC3 462 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 BARX2Q9UMQ3 279 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-206ENST00000465877 EXOC7Q9UPT5 735 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 TMEM189-UBE2V1I3L0A0 370 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 CXCL14O95715 111 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 SRGAP2BP0DMP2 458 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 SYKP43405 635 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 CLCNKBP51801 687 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 NDUFA8P51970 172 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 EHHADHQ08426 723 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 ADAM15Q13444 863 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 KCNC3Q14003 757 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 CLUL1Q15846 466 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 SLC10A6Q3KNW5 377 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 TPRNQ4KMQ1 711 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 LLGL2Q6P1M3 1020 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 STXBP4Q6ZWJ1 553 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 C3orf58Q8NDZ4 430 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.06□□□□□ -0.16
COL5A1-206ENST00000465877 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 B3GALT6Q96L58 329 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 GPR62Q9BZJ7 368 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 GOLPH3LQ9H4A5 285 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 MRPL17Q9NRX2 175 aaKnown RBP14.06□□□□□ -0.16
COL5A1-206ENST00000465877 CLEC1BQ9P126 229 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 TUBGCP4Q9UGJ1 667 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 USP25Q9UHP3 1055 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
COL5A1-206ENST00000465877 HCFC2Q9Y5Z7 792 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 STYXL1Q9Y6J8 313 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 UBE4BO95155 1302 aa14.06□□□□□ -0.16
COL5A1-206ENST00000465877 NCOR1O75376 2440 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 SCN1AP35498 2009 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 TTC26A0AVF1 554 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 C2CD2LO14523 706 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 EIF3DO15371 548 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 CLASP2O75122 1294 aaKnown RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 TADA2AO75478 443 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 PRPF6O94906 941 aaKnown RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 IL9P15248 144 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 DSG1Q02413 1049 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 UPP1Q16831 310 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 USP41Q3LFD5 358 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 RTP2Q5QGT7 225 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 SLFN12LQ6IEE8 588 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 PTCRAQ6ISU1 281 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 TAS1R1Q7RTX1 841 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 SYCP3Q8IZU3 236 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 POMGNT1Q8WZA1 660 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 C18orf25Q96B23 403 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 PAGE5Q96GU1 130 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 MSLNLQ96KJ4 702 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 COL25A1Q9BXS0 654 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 TMEM206Q9H813 350 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 RPF1Q9H9Y2 349 aaKnown RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 PLEKHA5Q9HAU0 1116 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 CD207Q9UJ71 328 aa14.05□□□□□ -0.16
COL5A1-206ENST00000465877 CPSF3Q9UKF6 684 aaKnown RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 AGO2Q9UKV8 859 aaKnown RBP14.05□□□□□ -0.16
COL5A1-206ENST00000465877 PODXLO00592 558 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 LILRB3O75022 631 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 BMP1P13497 986 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 ADSSP30520 456 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 SPAG1Q07617 926 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 ELAVL2Q12926 359 aaKnown RBP14.04□□□□□ -0.16
COL5A1-206ENST00000465877 SMAD4Q13485 552 aaKnown RBP14.04□□□□□ -0.16
COL5A1-206ENST00000465877 KIAA1841Q6NSI8 718 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 EPM2AIP1Q7L775 607 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-206ENST00000465877 TMEM87AQ8NBN3 555 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 SMRP1Q8NCR6 262 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 CASP10Q92851 521 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 EMILIN2Q9BXX0 1053 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 CHST7Q9NS84 486 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 SSX2IPQ9Y2D8 614 aa14.04□□□□□ -0.16
COL5A1-206ENST00000465877 PVALEFA0A1B0GWK0 134 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 LACTBL1A8MY62 500 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 MBTPS2O43462 519 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 KLRC4O43908 158 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 B3GAT3O94766 335 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 MYL1P05976 194 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 CNPP09543 421 aaKnown RBP14.03□□□□□ -0.16
COL5A1-206ENST00000465877 GARTP22102 1010 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 IGFBP6P24592 240 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-206ENST00000465877 ACOT2P49753 483 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 PUS10Q3MIT2 529 aaKnown RBP14.03□□□□□ -0.16
COL5A1-206ENST00000465877 FAM171A1Q5VUB5 890 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 KIAA0319Q5VV43 1072 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 TMEM184AQ6ZMB5 413 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 RIN2Q8WYP3 895 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-206ENST00000465877 KIF12Q96FN5 646 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 KLHL5Q96PQ7 755 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 UHRF1Q96T88 793 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms