RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC17A8Q8NDX2 589 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 DENND1AQ8TEH3 1009 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 DCLK3Q9C098 648 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 RGL1Q9NZL6 768 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 EMSYQ7Z589 1322 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 FAM170AA1A519 330 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 EML1O00423 815 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 PMM2O15305 246 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 ATMINO43313 823 aaPredicted RBP21.01■□□□□ 0.95
SDF4-205ENST00000465727 ECE2O60344 883 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 CYP3A4P08684 503 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 T-ENOLP0DO92 83 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 SHMT1P34896 483 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 SNX1Q13596 522 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 SLC45A4Q5BKX6 768 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 NOP9Q86U38 636 aaKnown RBP21.01■□□□□ 0.95
SDF4-205ENST00000465727 TRABD2AQ86V40 505 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 GALNT15Q8N3T1 639 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 LARGE2Q8N3Y3 721 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 ZNF398Q8TD17 642 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 P2RX7Q99572 595 aaKnown RBP21.01■□□□□ 0.95
SDF4-205ENST00000465727 AMNQ9BXJ7 453 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 CHST7Q9NS84 486 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 DAGLAQ9Y4D2 1042 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 SGPL1O95470 568 aa21■□□□□ 0.95
SDF4-205ENST00000465727 MARK3P27448 753 aa21■□□□□ 0.95
SDF4-205ENST00000465727 DNAJC3Q13217 504 aa21■□□□□ 0.95
SDF4-205ENST00000465727 PICALMQ13492 652 aa21■□□□□ 0.95
SDF4-205ENST00000465727 ODR4Q5SWX8 454 aa21■□□□□ 0.95
SDF4-205ENST00000465727 SYCP3Q8IZU3 236 aa21■□□□□ 0.95
SDF4-205ENST00000465727 C10orf82Q8WW14 230 aa21■□□□□ 0.95
SDF4-205ENST00000465727 CFAP57Q96MR6 1250 aa21■□□□□ 0.95
SDF4-205ENST00000465727 ATP2B4P23634 1241 aa21■□□□□ 0.95
SDF4-205ENST00000465727 GCLCP48506 637 aaPredicted RBP21■□□□□ 0.95
SDF4-205ENST00000465727 RAB27AP51159 221 aa21■□□□□ 0.95
SDF4-205ENST00000465727 VAMP7P51809 220 aa21■□□□□ 0.95
SDF4-205ENST00000465727 RASA3Q14644 834 aa21■□□□□ 0.95
SDF4-205ENST00000465727 TMED2Q15363 201 aa21■□□□□ 0.95
SDF4-205ENST00000465727 MUM1Q2TAK8 710 aa21■□□□□ 0.95
SDF4-205ENST00000465727 SEPT14Q6ZU15 432 aa21■□□□□ 0.95
SDF4-205ENST00000465727 MAEAQ7L5Y9 396 aa21■□□□□ 0.95
SDF4-205ENST00000465727 KSR1Q8IVT5 923 aa21■□□□□ 0.95
SDF4-205ENST00000465727 LRRC8CQ8TDW0 803 aa21■□□□□ 0.95
SDF4-205ENST00000465727 TEKT4Q8WW24 435 aa21■□□□□ 0.95
SDF4-205ENST00000465727 BTBD6Q96KE9 485 aa21■□□□□ 0.95
SDF4-205ENST00000465727 CCDC17Q96LX7 622 aa21■□□□□ 0.95
SDF4-205ENST00000465727 PAIP2Q9BPZ3 127 aaKnown RBP21■□□□□ 0.95
SDF4-205ENST00000465727 STRA6Q9BX79 667 aa21■□□□□ 0.95
SDF4-205ENST00000465727 CHORDC1Q9UHD1 332 aaPredicted RBP21■□□□□ 0.95
SDF4-205ENST00000465727 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
SDF4-205ENST00000465727 EPHB2P29323 1055 aa20.99■□□□□ 0.95
SDF4-205ENST00000465727 FMO1Q01740 532 aa20.99■□□□□ 0.95
SDF4-205ENST00000465727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.99■□□□□ 0.951e-11■■■□□ 18.6
SDF4-205ENST00000465727 CCDC24Q8N4L8 307 aa20.99■□□□□ 0.95
SDF4-205ENST00000465727 PPCSQ9HAB8 311 aa20.99■□□□□ 0.95
SDF4-205ENST00000465727 LRRC4BQ9NT99 713 aa20.99■□□□□ 0.95
SDF4-205ENST00000465727 DNAJC17Q9NVM6 304 aaKnown RBP20.99■□□□□ 0.95
SDF4-205ENST00000465727 LRCH1Q9Y2L9 728 aa20.99■□□□□ 0.95
SDF4-205ENST00000465727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.99■□□□□ 0.95
SDF4-205ENST00000465727 NEU2Q9Y3R4 380 aa20.99■□□□□ 0.95
SDF4-205ENST00000465727 SLITRK3O94933 977 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 GNAT1P11488 350 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 VHLP40337 213 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 RNASELQ05823 741 aaKnown RBP20.98■□□□□ 0.95
SDF4-205ENST00000465727 TNIP1Q15025 636 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 SYDE2Q5VT97 1194 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 TMEM154Q6P9G4 183 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 TPH2Q8IWU9 490 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 C12orf56Q8IXR9 622 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 FAM136AQ96C01 138 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 TTC25Q96NG3 672 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 SYT15Q9BQS2 421 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 DENND2DQ9H6A0 471 aaPredicted RBP20.98■□□□□ 0.95
SDF4-205ENST00000465727 ZNF536O15090 1300 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 C2CD2LO14523 706 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 NVLO15381 856 aaKnown RBP20.98■□□□□ 0.95
SDF4-205ENST00000465727 PDHA1P08559 390 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 GSTA2P09210 222 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 SLC1A1P43005 524 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 TRAF1Q13077 416 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 ZRSR2Q15696 482 aaKnown RBP20.98■□□□□ 0.95
SDF4-205ENST00000465727 NBPF20Q3BBV1 942 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 GNPTABQ3T906 1256 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 ZNF365Q70YC5 407 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 CPNE8Q86YQ8 564 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 MKL1Q969V6 931 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 ZNF333Q96JL9 665 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 FAM81BQ96LP2 452 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 GPR101Q96P66 508 aaPredicted RBP20.98■□□□□ 0.95
SDF4-205ENST00000465727 TUBB6Q9BUF5 446 aa20.98■□□□□ 0.95
SDF4-205ENST00000465727 EXOC1LA0A1B0GW35 172 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 GSTTP1A0A1W2PQM5 241 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 UFL1O94874 794 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 SP100P23497 879 aaPredicted RBP20.97■□□□□ 0.95
SDF4-205ENST00000465727 ZNF76P36508 570 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 MFAP3P55082 362 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 DLG4P78352 724 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 PPP3CAQ08209 521 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 ADCY1Q08828 1119 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 PPP2R5CQ13362 524 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms