RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 C3orf58Q8NDZ4 430 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 TCEAL4Q96EI5 215 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 NAP1L4Q99733 375 aaKnown RBP11.39□□□□□ -0.59
GPNMB-206ENST00000465673 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 PARD6AQ9NPB6 346 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 PRMT7Q9NVM4 692 aaPredicted RBP11.39□□□□□ -0.59
GPNMB-206ENST00000465673 MTRRQ9UBK8 725 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 SMG5Q9UPR3 1016 aaKnown RBP11.39□□□□□ -0.59
GPNMB-206ENST00000465673 PATJQ8NI35 1801 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 CDKL5O76039 1030 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 PRKCBP05771 671 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 TGM1P22735 817 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 PFKPQ01813 784 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 MTAPQ13126 283 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 PRPF4BQ13523 1007 aaKnown RBP11.38□□□□□ -0.59
GPNMB-206ENST00000465673 GRM2Q14416 872 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 FAM187BQ17R55 369 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.38□□□□□ -0.59
GPNMB-206ENST00000465673 CATSPER3Q86XQ3 398 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 NELL1Q92832 810 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 CLDN23Q96B33 292 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
GPNMB-206ENST00000465673 OSBPL6Q9BZF3 934 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 CCDC113Q9H0I3 377 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 ZSCAN32Q9NX65 697 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 NDRG2Q9UN36 371 aaKnown RBP11.38□□□□□ -0.59
GPNMB-206ENST00000465673 PCDHGA2Q9Y5H1 932 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 ZMYM2Q9UBW7 1377 aa11.38□□□□□ -0.59
GPNMB-206ENST00000465673 N4BP3O15049 544 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 SPTLC1O15269 473 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 NEMFO60524 1076 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 LILRB5O75023 590 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 LARGE1O95461 756 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 FCARP24071 287 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 CCR2P41597 374 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 ARPP19P56211 112 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 SOX4Q06945 474 aaPredicted RBP11.37□□□□□ -0.59
GPNMB-206ENST00000465673 MAPK6Q16659 721 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 UVSSAQ2YD98 709 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 NT5DC1Q5TFE4 455 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 ZBTB8OSQ8IWT0 167 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 TMEM130Q8N3G9 435 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 CEP120Q8N960 986 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 PRIMPOLQ96LW4 560 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 ZSWIM3Q96MP5 696 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 PPP1R10Q96QC0 940 aaKnown RBP11.37□□□□□ -0.59
GPNMB-206ENST00000465673 CORO1BQ9BR76 489 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 EPC1Q9H2F5 836 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 KCNH3Q9ULD8 1083 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 USP18Q9UMW8 372 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 ACACBO00763 2458 aa11.37□□□□□ -0.59
GPNMB-206ENST00000465673 WDR27A2RRH5 827 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 ACKR2O00590 384 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 JAK2O60674 1132 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 ECI2O75521 394 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 SEC24AO95486 1093 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 POU2F2P09086 479 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 XRCC6P12956 609 aaKnown RBP eCLIP11.36□□□□□ -0.59
GPNMB-206ENST00000465673 GJA1P17302 382 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 HOXC13P31276 330 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 MCM7P33993 719 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 OSTNP61366 133 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 ROR1Q01973 937 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 ELAVL2Q12926 359 aaKnown RBP11.36□□□□□ -0.59
GPNMB-206ENST00000465673 UPP1Q16831 310 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 FAM78AQ5JUQ0 283 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 ZNF852Q6ZMS4 543 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 DIS3L2Q8IYB7 885 aaKnown RBP11.36□□□□□ -0.59
GPNMB-206ENST00000465673 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 MCPH1Q8NEM0 835 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 DEPTORQ8TB45 409 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 PRMT8Q9NR22 394 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-206ENST00000465673 BACE2Q9Y5Z0 518 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 F5P12259 2224 aa11.36□□□□□ -0.59
GPNMB-206ENST00000465673 SMIM28A0A1B0GU29 152 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 TMEM189-UBE2V1I3L0A0 370 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 PRRG1O14668 218 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 PTPN2P17706 415 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 CYP11B2P19099 503 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 VIPR2P41587 438 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 RPS9P46781 194 aaKnown RBP11.35□□□□□ -0.59
GPNMB-206ENST00000465673 GUCY1B3Q02153 619 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 ECM1Q16610 540 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 PRSS36Q5K4E3 855 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 PDXDC1Q6P996 788 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 ZMAT2Q96NC0 199 aaKnown RBP11.35□□□□□ -0.59
GPNMB-206ENST00000465673 NELL2Q99435 816 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 ADPGKQ9BRR6 497 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 C2orf40Q9H1Z8 148 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 BRD9Q9H8M2 597 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 TUFT1Q9NNX1 390 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 GDE1Q9NZC3 331 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 CDV3Q9UKY7 258 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms