RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 PIH1D3Q9NQM4 214 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PRDM11Q9NQV5 511 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 KCNQ5Q9NR82 932 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SH2B1Q9NRF2 756 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SMYD2Q9NRG4 433 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AGPAT3Q9NRZ7 376 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ZFP57Q9NU63 452 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 DDX28Q9NUL7 540 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PARVAQ9NVD7 372 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC87Q9NVE4 849 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ETNK2Q9NVF9 386 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TBCCD1Q9NVR7 557 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 THAP1Q9NVV9 213 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TRNAU1APQ9NX07 287 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SAGE1Q9NXZ1 904 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SLC39A1Q9NY26 324 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ABI2Q9NYB9 513 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TMOD3Q9NYL9 352 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 IL20Q9NYY1 176 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GGA3Q9NZ52 723 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 STMN3Q9NZ72 180 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 HSPBP1Q9NZL4 362 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 EHD3Q9NZN3 535 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TMOD2Q9NZR1 351 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SELENONQ9NZV5 590 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ZIM2Q9NZV7 527 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AKAP7Q9P0M2 348 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SAMD15Q9P1V8 674 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SIRPGQ9P1W8 387 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 BTBD7Q9P203 1132 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 STIM2Q9P246 746 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SLAIN2Q9P270 581 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 KIF17Q9P2E2 1029 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 IFT80Q9P2H3 777 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PDP2Q9P2J9 529 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TBC1D14Q9P2M4 693 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NFKBIL1Q9UBC1 381 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 DNAJB4Q9UDY4 337 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GIMAP2Q9UG22 337 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ZRANB1Q9UGI0 708 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FETUBQ9UGM5 382 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PARP2Q9UGN5 583 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FBXO40Q9UH90 709 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SRP68Q9UHB9 627 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CYB5R1Q9UHQ9 305 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CYTH4Q9UIA0 394 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MBD1Q9UIS9 605 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CNOT7Q9UIV1 285 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TSPYL4Q9UJ04 414 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CPSF3Q9UKF6 684 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ANGPTL2Q9UKU9 493 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AGO2Q9UKV8 859 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 LRFN2Q9ULH4 789 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CLEC4AQ9UMR7 237 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 DUSP12Q9UNI6 340 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NSFL1CQ9UNZ2 370 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SCAF8Q9UPN6 1271 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AGAP1Q9UPQ3 857 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TRIM35Q9UPQ4 493 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AGTPBP1Q9UPW5 1226 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 HPS5Q9UPZ3 1129 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 DMTF1Q9Y222 760 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TRAF3IP3Q9Y228 551 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 POLHQ9Y253 713 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 DNAJC16Q9Y2G8 782 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 STK38LQ9Y2H1 464 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 INPP5FQ9Y2H2 1132 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AP3M1Q9Y2T2 418 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MED16Q9Y2X0 877 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GIT1Q9Y2X7 761 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TMX2Q9Y320 296 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MRPL11Q9Y3B7 192 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RTCBQ9Y3I0 505 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FAM32AQ9Y421 112 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 HBS1LQ9Y450 684 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GPSM3Q9Y4H4 160 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDHGB5Q9Y5G0 923 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDHGA11Q9Y5H2 935 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SNX14Q9Y5W7 946 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SNX13Q9Y5W8 968 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GPC6Q9Y625 555 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 STON1Q9Y6Q2 735 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AP1M2Q9Y6Q5 423 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC61Q9Y6R9 512 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 COMMD3-BMI1R4GMX3 469 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FPGT-TNNI3KV9GXZ4 949 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 UHRF1BP1LA0JNW5 1464 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ATAD2BQ9ULI0 1458 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC144AA2RUR9 1427 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PTPRGP23470 1445 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 WRNQ14191 1432 aaPredicted RBP eCLIP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 KIF27Q86VH2 1401 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MIA2Q96PC5 1412 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RRBP1Q9P2E9 1410 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NCOA3Q9Y6Q9 1424 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RB1CC1Q8TDY2 1594 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SBNO1A3KN83 1393 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CCNB3Q8WWL7 1395 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ACEP12821 1306 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PHLPP2Q6ZVD8 1323 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms