RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 HNRNPA1P09651 372 aaKnown RBP eCLIP22.88■■□□□ 1.25
CSPG5-204ENST00000465441 FSHRP23945 695 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 BRCC3P46736 316 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 ATP2C1P98194 919 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-204ENST00000465441 SOX4Q06945 474 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-204ENST00000465441 ZNF568Q3ZCX4 644 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 C3orf58Q8NDZ4 430 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 ZBTB45Q96K62 511 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-204ENST00000465441 ZMAT2Q96NC0 199 aaKnown RBP22.88■■□□□ 1.25
CSPG5-204ENST00000465441 TCHPQ9BT92 498 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 C17orf75Q9HAS0 396 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 MTRRQ9UBK8 725 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 VWA8A3KMH1 1905 aa22.88■■□□□ 1.25
CSPG5-204ENST00000465441 KRBA1A5PL33 1030 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 ANHXE9PGG2 379 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 I3L4J1 428 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 CCL16O15467 120 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 SRFP11831 508 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 PROZP22891 400 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 GUCY2CP25092 1073 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 GJB2P29033 226 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 TKTP29401 623 aaKnown RBP22.87■■□□□ 1.25
CSPG5-204ENST00000465441 UVSSAQ2YD98 709 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 HYIQ5T013 277 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 AXDND1Q5T1B0 1012 aaPredicted RBP22.87■■□□□ 1.25
CSPG5-204ENST00000465441 SYT2Q8N9I0 419 aaPredicted RBP22.87■■□□□ 1.25
CSPG5-204ENST00000465441 ACAP3Q96P50 834 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 PLIN2Q99541 437 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 RTP3Q9BQQ7 232 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 TIPINQ9BVW5 301 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 TOPORSQ9NS56 1045 aaPredicted RBP22.87■■□□□ 1.25
CSPG5-204ENST00000465441 CDY1Q9Y6F8 540 aa22.87■■□□□ 1.25
CSPG5-204ENST00000465441 STK25O00506 426 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 ABLIM1O14639 778 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 TRAPPC3O43617 180 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 GFRA3O60609 400 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 CD2BP2O95400 341 aaKnown RBP22.86■■□□□ 1.25
CSPG5-204ENST00000465441 MCF2P10911 925 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 HOXA9P31269 272 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 RAD51AP2Q09MP3 1159 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 SLC7A14Q8TBB6 771 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 DDX27Q96GQ7 796 aaKnown RBP22.86■■□□□ 1.25
CSPG5-204ENST00000465441 RPP25Q9BUL9 199 aaKnown RBP22.86■■□□□ 1.25
CSPG5-204ENST00000465441 CA14Q9ULX7 337 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 POLIQ9UNA4 740 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 BACE2Q9Y5Z0 518 aa22.86■■□□□ 1.25
CSPG5-204ENST00000465441 ZFP37Q9Y6Q3 630 aaPredicted RBP22.86■■□□□ 1.25
CSPG5-204ENST00000465441 PROB1E7EW31 1015 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 H3BQV1 296 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 HTR4Q13639 388 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 MPZL3Q6UWV2 235 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 GPR152Q8TDT2 470 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 SPIRE2Q8WWL2 714 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 SLC38A7Q9NVC3 462 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 KCNG1Q9UIX4 513 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 CDH7Q9ULB5 785 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 NUMBLQ9Y6R0 609 aa22.85■■□□□ 1.25
CSPG5-204ENST00000465441 VWA3AA6NCI4 1184 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 XYLBO75191 536 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 HARSP12081 509 aaKnown RBP22.84■■□□□ 1.25
CSPG5-204ENST00000465441 PLS3P13797 630 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 KCNE1P15382 129 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 SLC12A3P55017 1021 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 PARM1Q6UWI2 310 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 ANKS3Q6ZW76 656 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 KCTD17Q8N5Z5 321 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 ITFG1Q8TB96 612 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 SNX27Q96L92 541 aa22.84■■□□□ 1.25
CSPG5-204ENST00000465441 DNMT3BQ9UBC3 853 aaKnown RBP22.84■■□□□ 1.25
CSPG5-204ENST00000465441 PODXLO00592 558 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 MEFVO15553 781 aaPredicted RBP22.83■■□□□ 1.25
CSPG5-204ENST00000465441 PLA2G4BP0C869 781 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 SMTNP53814 917 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 STRN3Q13033 797 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 SEZ6Q53EL9 994 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 CCDC105Q8IYK2 499 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 DTWD2Q8NBA8 298 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 TMEM161BQ8NDZ6 487 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 FGF13Q92913 245 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 FGF14Q92915 247 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 C18orf25Q96B23 403 aaPredicted RBP22.83■■□□□ 1.25
CSPG5-204ENST00000465441 HCFC1R1Q9NWW0 138 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 CNTN3Q9P232 1028 aa22.83■■□□□ 1.25
CSPG5-204ENST00000465441 CACNA1HO95180 2353 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 NPHP3-ACAD11A0A0J9YXS1 232 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 TOM1L1O75674 476 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 POU2F2P09086 479 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 NBL1P41271 181 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 SLC10A6Q3KNW5 377 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 VARS2Q5ST30 1063 aaKnown RBP22.82■■□□□ 1.24
CSPG5-204ENST00000465441 ARL6IP4Q66PJ3 421 aaKnown RBP22.82■■□□□ 1.24
CSPG5-204ENST00000465441 RTL10Q7L3V2 364 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 SLC2A4RGQ9NR83 387 aa22.82■■□□□ 1.24
CSPG5-204ENST00000465441 MAPTP10636 758 aaKnown RBP22.81■■□□□ 1.24
CSPG5-204ENST00000465441 RPL9P32969 192 aaKnown RBP22.81■■□□□ 1.24
CSPG5-204ENST00000465441 GPC5P78333 572 aa22.81■■□□□ 1.24
CSPG5-204ENST00000465441 CACNB1Q02641 598 aaPredicted RBP22.81■■□□□ 1.24
CSPG5-204ENST00000465441 TMEM119Q4V9L6 283 aa22.81■■□□□ 1.24
CSPG5-204ENST00000465441 ARSHQ5FYA8 562 aa22.81■■□□□ 1.24
CSPG5-204ENST00000465441 ASCL5Q7RTU5 278 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms