RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 KIAA1586Q9HCI6 787 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 CYP26B1Q9NR63 512 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 ASIC3Q9UHC3 531 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 GOLGA6L7A0A1B0GV03 622 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 C5orf60A6NFR6 353 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 RASGRF2O14827 1237 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 MYBL1P10243 752 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 UNGP13051 313 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-204ENST00000465425 NSFP46459 744 aaKnown RBP19.57■□□□□ 0.72
SYNE4-204ENST00000465425 SLCO1A2P46721 670 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 BPIFB4P59827 614 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 DRP2Q13474 957 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 EPS8L3Q8TE67 593 aaKnown RBP19.57■□□□□ 0.72
SYNE4-204ENST00000465425 CPA5Q8WXQ8 436 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 CDHR1Q96JP9 859 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 PDGFDQ9GZP0 370 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-204ENST00000465425 SLC9A2Q9UBY0 812 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 EXTL3O43909 919 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 SLC1A1P43005 524 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 SNX1Q13596 522 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 LMBRD2Q68DH5 695 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-204ENST00000465425 CCDC60Q8IWA6 550 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-204ENST00000465425 SLCO2A1Q92959 643 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 AVENQ9NQS1 362 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-204ENST00000465425 XPNPEP1Q9NQW7 623 aa19.57■□□□□ 0.72
SYNE4-204ENST00000465425 TNS1Q9HBL0 1735 aaKnown RBP19.56■□□□□ 0.72
SYNE4-204ENST00000465425 VGLL3A8MV65 326 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 EGFRP00533 1210 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 RRM1P23921 792 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 RXRBP28702 533 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 MAN1A1P33908 653 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 PIK3CAP42336 1068 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 BACE1P56817 501 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 IFI35P80217 286 aaPredicted RBP19.56■□□□□ 0.72
SYNE4-204ENST00000465425 STRN3Q13033 797 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 TAOK1Q7L7X3 1001 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 CNPY4Q8N129 248 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 FAM84AQ96KN4 292 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 TMEM109Q9BVC6 243 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 CCDC113Q9H0I3 377 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 WHRNQ9P202 907 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 ARHGAP28Q9P2N2 729 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 MROH7Q68CQ1 1323 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 MTERF2Q49AM1 385 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 TRMT10CQ7L0Y3 403 aaKnown RBP19.56■□□□□ 0.72
SYNE4-204ENST00000465425 GRK7Q8WTQ7 553 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 INTS9Q9NV88 658 aaKnown RBP19.56■□□□□ 0.72
SYNE4-204ENST00000465425 KCNG1Q9UIX4 513 aa19.56■□□□□ 0.72
SYNE4-204ENST00000465425 SORBS3O60504 671 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 STBD1O95210 358 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 GAS8O95995 478 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 POLGP54098 1239 aaPredicted RBP19.55■□□□□ 0.72
SYNE4-204ENST00000465425 ACTR2P61160 394 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 ACTN3Q08043 901 aaPredicted RBP19.55■□□□□ 0.72
SYNE4-204ENST00000465425 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
SYNE4-204ENST00000465425 UBAP2Q5T6F2 1119 aaKnown RBP19.55■□□□□ 0.72
SYNE4-204ENST00000465425 TAS1R3Q7RTX0 852 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 PHLDB2Q86SQ0 1253 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 ZNF516Q92618 1163 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 TRIM7Q9C029 511 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 AS3MTQ9HBK9 375 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 RGPD3A6NKT7 1758 aaPredicted RBP19.55■□□□□ 0.72
SYNE4-204ENST00000465425 RGPD4Q7Z3J3 1758 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 MYPNQ86TC9 1320 aa19.55■□□□□ 0.72
SYNE4-204ENST00000465425 RGS20O76081 388 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 DRD4P21917 467 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 PLCB4Q15147 1175 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 GNPTABQ3T906 1256 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 MIS18BP1Q6P0N0 1132 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 C15orf39Q6ZRI6 1047 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 CCDC50Q8IVM0 306 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 CCDC13Q8IYE1 715 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 NFASCO94856 1347 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 HLA-DRAP01903 254 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 ITIH2P19823 946 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 PSMD6Q15008 389 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 ZACNQ401N2 412 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 LIN9Q5TKA1 542 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 SYDE1Q6ZW31 735 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-204ENST00000465425 ATG4AQ8WYN0 398 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 SNF8Q96H20 258 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 CCDC114Q96M63 670 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 CAMKK2Q96RR4 588 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 ROPN1BQ9BZX4 212 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-204ENST00000465425 CDC42EP4Q9H3Q1 356 aaKnown RBP19.54■□□□□ 0.72
SYNE4-204ENST00000465425 ACTR5Q9H9F9 607 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-204ENST00000465425 ROPN1Q9HAT0 212 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-204ENST00000465425 CHST7Q9NS84 486 aa19.54■□□□□ 0.72
SYNE4-204ENST00000465425 AGO2Q9UKV8 859 aaKnown RBP19.54■□□□□ 0.72
SYNE4-204ENST00000465425 POTEJP0CG39 1038 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 HNRNPH1P31943 449 aaKnown RBP19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ACOT2P49753 483 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 OAZ1P54368 228 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 CENPCQ03188 943 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 C2CD6Q53TS8 623 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 XKR3Q5GH77 459 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ZNF280CQ8ND82 737 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 PICK1Q9NRD5 415 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms