RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF529Q6P280 563 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 GADL1Q6ZQY3 521 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 RNF169Q8NCN4 708 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 JDP2Q8WYK2 163 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 KAT5Q92993 513 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 REXO4Q9GZR2 422 aaKnown RBP7.73□□□□□ -1.17
PTCD3-205ENST00000464541 TCEAL9Q9UHQ7 104 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 DRGXA6NNA5 263 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 MATN3O15232 486 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 SPATA31D3P0C874 917 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 APOBEC3AP31941 199 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-205ENST00000464541 RAP2BP61225 183 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 GTF2H3Q13889 308 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 PABPC1LQ4VXU2 614 aaKnown RBP7.72□□□□□ -1.17
PTCD3-205ENST00000464541 SPATA31D4Q6ZUB0 917 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 SYT12Q8IV01 421 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 FAM193BQ96PV7 902 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-205ENST00000464541 PLEKHG4BQ96PX9 1271 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 DMRTA2Q96SC8 542 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 SLC46A2Q9BY10 475 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 SORCS3Q9UPU3 1222 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 EID1Q9Y6B2 187 aa7.72□□□□□ -1.17
PTCD3-205ENST00000464541 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 GAGE12HA6NDE8 117 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 OFD1O75665 1012 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 FTH1P19P0C7X4 201 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 TNFRSF1AP19438 455 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 NHLH2Q02577 135 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 PGS1Q32NB8 556 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 ATAT1Q5SQI0 421 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 CXorf57Q6NSI4 855 aaKnown RBP7.71□□□□□ -1.18
PTCD3-205ENST00000464541 GDF7Q7Z4P5 450 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 C3orf20Q8ND61 904 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 HPS3Q969F9 1004 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 MVB12AQ96EY5 273 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 MAP3K14Q99558 947 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 GTPBP4Q9BZE4 634 aaKnown RBP7.71□□□□□ -1.18
PTCD3-205ENST00000464541 KMT5AQ9NQR1 393 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 RUVBL1Q9Y265 456 aaKnown RBP7.71□□□□□ -1.18
PTCD3-205ENST00000464541 CHST2Q9Y4C5 530 aa7.71□□□□□ -1.18
PTCD3-205ENST00000464541 LEFTY2O00292 366 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 SCAF4O95104 1147 aaKnown RBP7.7□□□□□ -1.18
PTCD3-205ENST00000464541 C1SP09871 688 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 HSPA6P17066 643 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 IL12RB1P42701 662 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 PUM1Q14671 1186 aaKnown RBP eCLIP7.7□□□□□ -1.189e-7■□□□□ 9.3
PTCD3-205ENST00000464541 PPP2R5AQ15172 486 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 FAM102AQ5T9C2 384 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-205ENST00000464541 AGAP9Q5VTM2 703 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 RHOT2Q8IXI1 618 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 CHPFQ8IZ52 775 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 DCBLD1Q8N8Z6 715 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 IL17RDQ8NFM7 739 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 CPT1CQ8TCG5 803 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 FAM167AQ96KS9 214 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 ZNF747Q9BV97 191 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 VPS11Q9H270 941 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 SLC12A5Q9H2X9 1139 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 NMRK2Q9NPI5 230 aa7.7□□□□□ -1.18
PTCD3-205ENST00000464541 SIDT1Q9NXL6 827 aaKnown RBP7.7□□□□□ -1.18
PTCD3-205ENST00000464541 HAUS5O94927 633 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 CHN2P52757 468 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 TUBA3CQ13748 450 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 IFIT1BQ5T764 474 aaKnown RBP7.69□□□□□ -1.18
PTCD3-205ENST00000464541 METRNLQ641Q3 311 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 NXNQ6DKJ4 435 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 TUBA3EQ6PEY2 450 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 CRIP3Q6Q6R5 217 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 CATIPQ7Z7H3 387 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 SLC25A43Q8WUT9 341 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-205ENST00000464541 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 RGMAQ96B86 450 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 C1GALT1C1Q96EU7 318 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 MYOCQ99972 504 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
PTCD3-205ENST00000464541 AHRRA9YTQ3 701 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 GRM6O15303 877 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 MALP21145 153 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 GCSHP23434 173 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 PTGS2P35354 604 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 HK3P52790 923 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 ZNF280AP59817 542 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-205ENST00000464541 SLC25A3Q00325 362 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 KHDC1Q4VXA5 237 aaKnown RBP7.68□□□□□ -1.18
PTCD3-205ENST00000464541 FAM102BQ5T8I3 360 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 ARMC6Q6NXE6 501 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 MED25Q71SY5 747 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 ZNF276Q8N554 614 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 FITM2Q8N6M3 262 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 GNL3LQ9NVN8 582 aaKnown RBP7.68□□□□□ -1.18
PTCD3-205ENST00000464541 FBXO34Q9NWN3 711 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 TRPM5Q9NZQ8 1165 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 ATP11BQ9Y2G3 1177 aa7.68□□□□□ -1.18
PTCD3-205ENST00000464541 TCRBV7S2A1N4TA0A589 114 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 RNASET2O00584 256 aaKnown RBP7.67□□□□□ -1.18
PTCD3-205ENST00000464541 KIAA0391O15091 583 aaKnown RBP7.67□□□□□ -1.18
PTCD3-205ENST00000464541 SCGB1D2O95969 90 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 CD1AP06126 327 aa7.67□□□□□ -1.18
PTCD3-205ENST00000464541 RNASE9P60153 205 aaKnown RBP7.67□□□□□ -1.18
PTCD3-205ENST00000464541 NOGQ13253 232 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms