RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 PDE12Q6L8Q7 609 aaKnown RBP22.74■■□□□ 1.23
CD58-204ENST00000464088 STXBP4Q6ZWJ1 553 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 APBB1IPQ7Z5R6 666 aaPredicted RBP22.74■■□□□ 1.23
CD58-204ENST00000464088 RSPH1Q8WYR4 309 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 ERCC4Q92889 916 aaPredicted RBP22.74■■□□□ 1.23
CD58-204ENST00000464088 TCHPQ9BT92 498 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 TMEM206Q9H813 350 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 UBN1Q9NPG3 1134 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 ANKFY1Q9P2R3 1169 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 EXOC7Q9UPT5 735 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 GIT1Q9Y2X7 761 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 PCDHB12Q9Y5F1 795 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 PCDHA5Q9Y5H7 936 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 UBE4BO95155 1302 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 PTPRZ1P23471 2315 aaPredicted RBP22.74■■□□□ 1.23
CD58-204ENST00000464088 CITO14578 2027 aa22.74■■□□□ 1.23
CD58-204ENST00000464088 A0A0B4J269 797 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 H0Y858 1186 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 CLDN3O15551 220 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 GALR2O43603 387 aaPredicted RBP22.73■■□□□ 1.23
CD58-204ENST00000464088 FAM189A1O60320 539 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 AKAP5P24588 427 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 GRM5P41594 1212 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 AFF1P51825 1210 aaKnown RBP22.73■■□□□ 1.23
CD58-204ENST00000464088 GLB1LQ6UWU2 654 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 LRRC55Q6ZSA7 311 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 HACE1Q8IYU2 909 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 MICAL1Q8TDZ2 1067 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 GSDMAQ96QA5 445 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 APOL6Q9BWW8 343 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 SNTG2Q9NY99 539 aa22.73■■□□□ 1.23
CD58-204ENST00000464088 HOOK1Q9UJC3 728 aaKnown RBP22.73■■□□□ 1.23
CD58-204ENST00000464088 GOLGA6L22H0YM25 854 aa22.72■■□□□ 1.23
CD58-204ENST00000464088 FSCN2O14926 492 aa22.72■■□□□ 1.23
CD58-204ENST00000464088 ADSSP30520 456 aa22.72■■□□□ 1.23
CD58-204ENST00000464088 ABI1Q8IZP0 508 aa22.72■■□□□ 1.23
CD58-204ENST00000464088 GSTCDQ8NEC7 633 aa22.72■■□□□ 1.23
CD58-204ENST00000464088 CCDC47Q96A33 483 aaKnown RBP22.72■■□□□ 1.23
CD58-204ENST00000464088 AAASQ9NRG9 546 aa22.72■■□□□ 1.23
CD58-204ENST00000464088 HCSTQ9UBK5 93 aa22.72■■□□□ 1.23
CD58-204ENST00000464088 TDRD15B5MCY1 1934 aaKnown RBP22.72■■□□□ 1.23
CD58-204ENST00000464088 FGF18O76093 207 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 RECQL4O94761 1208 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 PDGFBP01127 241 aaPredicted RBP22.71■■□□□ 1.23
CD58-204ENST00000464088 HARSP12081 509 aaKnown RBP22.71■■□□□ 1.23
CD58-204ENST00000464088 MLH1P40692 756 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 NBL1P41271 181 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 ERVFC1P60507 584 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 NOMO2Q5JPE7 1267 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 SLFN12LQ6IEE8 588 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 ANKRD54Q6NXT1 300 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 ASCL5Q7RTU5 278 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 LRRC43Q8N309 656 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 GPT2Q8TD30 523 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 ZFP42Q96MM3 310 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 GAD1Q99259 594 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 CWH43Q9H720 699 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 MIOSQ9NXC5 875 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 PARP2Q9UGN5 583 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 GDAQ9Y2T3 454 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 VPS13AQ96RL7 3174 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 DCHS1Q96JQ0 3298 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 DMDP11532 3685 aa22.71■■□□□ 1.23
CD58-204ENST00000464088 MYO10Q9HD67 2058 aa22.7■■□□□ 1.23
CD58-204ENST00000464088 ARL5CA6NH57 179 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 MEFVO15553 781 aaPredicted RBP22.7■■□□□ 1.22
CD58-204ENST00000464088 TGFB1I1O43294 461 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 SMC2O95347 1197 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 SRGAP2BP0DMP2 458 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 SYCE2Q6PIF2 218 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 THNSL1Q8IYQ7 743 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 SYCP3Q8IZU3 236 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 SMARCE1Q969G3 411 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 CCDC94Q9BW85 323 aaPredicted RBP22.7■■□□□ 1.22
CD58-204ENST00000464088 MRPL9Q9BYD2 267 aaKnown RBP22.7■■□□□ 1.22
CD58-204ENST00000464088 CXCL16Q9H2A7 254 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 TYW1Q9NV66 732 aaKnown RBP22.7■■□□□ 1.22
CD58-204ENST00000464088 TBC1D13Q9NVG8 400 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 KLK14Q9P0G3 267 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 LZTS1Q9Y250 596 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 INPP5FQ9Y2H2 1132 aa22.7■■□□□ 1.22
CD58-204ENST00000464088 PDCD11Q14690 1871 aaKnown RBP22.69■■□□□ 1.22
CD58-204ENST00000464088 OGTO15294 1046 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 GARTP22102 1010 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 SEZ6Q53EL9 994 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 ZBTB41Q5SVQ8 909 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 NELFCDQ8IXH7 590 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 MSTO1Q9BUK6 570 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 GBP3Q9H0R5 595 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 CLSTN2Q9H4D0 955 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 RMND1Q9NWS8 449 aa22.69■■□□□ 1.22
CD58-204ENST00000464088 RIF1Q5UIP0 2472 aaKnown RBP22.69■■□□□ 1.22
CD58-204ENST00000464088 FAM186AA6NE01 2351 aa22.68■■□□□ 1.22
CD58-204ENST00000464088 PRR23AA6NEV1 266 aa22.68■■□□□ 1.22
CD58-204ENST00000464088 B4GALT3O60512 393 aa22.68■■□□□ 1.22
CD58-204ENST00000464088 HOXB8P17481 243 aaPredicted RBP22.68■■□□□ 1.22
CD58-204ENST00000464088 MCM4P33991 863 aa22.68■■□□□ 1.22
CD58-204ENST00000464088 MATR3P43243 847 aaKnown RBP eCLIP22.68■■□□□ 1.22
CD58-204ENST00000464088 OSTNP61366 133 aa22.68■■□□□ 1.22
CD58-204ENST00000464088 KNOP1Q1ED39 458 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms