RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SLC30A4O14863 429 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 USO1O60763 962 aaKnown RBP15.98■□□□□ 0.15
SMC1A-204ENST00000463684 LRP3O75074 770 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 RECQL4O94761 1208 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 B3GAT3O94766 335 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 RETP07949 1114 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 CCR3P51677 355 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 PRPF4BQ13523 1007 aaKnown RBP15.98■□□□□ 0.15
SMC1A-204ENST00000463684 NAB2Q15742 525 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 FAM187BQ17R55 369 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 SLC5A9Q2M3M2 681 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 PRR23BQ6ZRT6 265 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 MAEAQ7L5Y9 396 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 SKAP1Q86WV1 359 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 PIGOQ8TEQ8 1089 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 IRF7Q92985 503 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 LARP6Q9BRS8 491 aaKnown RBP15.98■□□□□ 0.15
SMC1A-204ENST00000463684 TRMT61BQ9BVS5 477 aaKnown RBP15.98■□□□□ 0.15
SMC1A-204ENST00000463684 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 CHRDQ9H2X0 955 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 FZD8Q9H461 694 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 PDZD7Q9H5P4 517 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 LMAN1LQ9HAT1 526 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 BACE2Q9Y5Z0 518 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 CYP46A1Q9Y6A2 500 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.98■□□□□ 0.15
SMC1A-204ENST00000463684 EPG5Q9HCE0 2579 aa15.98■□□□□ 0.15
SMC1A-204ENST00000463684 KMT2BQ9UMN6 2715 aaPredicted RBP15.97■□□□□ 0.15
SMC1A-204ENST00000463684 PATJQ8NI35 1801 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.97■□□□□ 0.15
SMC1A-204ENST00000463684 PRRG1O14668 218 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 ZNF197O14709 1029 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 CDKL5O76039 1030 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 XRCC6P12956 609 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMC1A-204ENST00000463684 CEBPBP17676 345 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 GRM2Q14416 872 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 NOSTRINQ8IVI9 506 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 OXER1Q8TDS5 423 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 FAM3CQ92520 227 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 CORO1BQ9BR76 489 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 ZSWIM6Q9HCJ5 1215 aa15.97■□□□□ 0.15
SMC1A-204ENST00000463684 SHISA7A6NL88 538 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 TMEM189-UBE2V1I3L0A0 370 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 REC8O95072 547 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 TDGF1P13385 188 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 TKTP29401 623 aaKnown RBP15.96■□□□□ 0.15
SMC1A-204ENST00000463684 CXCL12P48061 93 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 RBM25P49756 843 aaKnown RBP15.96■□□□□ 0.15
SMC1A-204ENST00000463684 SIM2Q14190 667 aaPredicted RBP15.96■□□□□ 0.15
SMC1A-204ENST00000463684 CALCRLQ16602 461 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 MAPK6Q16659 721 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 ZNF687Q8N1G0 1237 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 MCPH1Q8NEM0 835 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 ZNF461Q8TAF7 563 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 UROC1Q96N76 676 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 CXCL16Q9H2A7 254 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 TTC12Q9H892 705 aaPredicted RBP15.96■□□□□ 0.15
SMC1A-204ENST00000463684 GPRC5CQ9NQ84 441 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.15
SMC1A-204ENST00000463684 GDAQ9Y2T3 454 aa15.96■□□□□ 0.15
SMC1A-204ENST00000463684 A0A087WWV3 80 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 ARHGEF37A1IGU5 675 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 MICAL2O94851 1124 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 LIG1P18858 919 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 TXKP42681 527 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 CLCNKBP51801 687 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 FAM78AQ5JUQ0 283 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 CYP4A22Q5TCH4 519 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 CDCA2Q69YH5 1023 aaPredicted RBP15.95■□□□□ 0.14
SMC1A-204ENST00000463684 PDZD4Q76G19 769 aaPredicted RBP15.95■□□□□ 0.14
SMC1A-204ENST00000463684 ZNF334Q9HCZ1 680 aaPredicted RBP15.95■□□□□ 0.14
SMC1A-204ENST00000463684 TRPV5Q9NQA5 729 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 SEMA4GQ9NTN9 838 aa15.95■□□□□ 0.14
SMC1A-204ENST00000463684 TTLL13PA6NNM8 815 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 ACKR2O00590 384 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 FOXD2O60548 495 aaPredicted RBP15.94■□□□□ 0.14
SMC1A-204ENST00000463684 PRKCBP05771 671 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 PSMC3P17980 439 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 FCARP24071 287 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 GDI1P31150 447 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 ARPP19P56211 112 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 CSRP2Q16527 193 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 UPP1Q16831 310 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 DCAF4L1Q3SXM0 396 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 EARS2Q5JPH6 523 aaKnown RBP15.94■□□□□ 0.14
SMC1A-204ENST00000463684 PRSS36Q5K4E3 855 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 SLC8B1Q6J4K2 584 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 POTEHQ6S545 545 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 PRR23CQ6ZRP0 262 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 ELMOD1Q8N336 334 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 DDX1Q92499 740 aaKnown RBP15.94■□□□□ 0.14
SMC1A-204ENST00000463684 DDX27Q96GQ7 796 aaKnown RBP15.94■□□□□ 0.14
SMC1A-204ENST00000463684 ASB16Q96NS5 453 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 CYP4F11Q9HBI6 524 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 BRMS1Q9HCU9 246 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 GJB4Q9NTQ9 266 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 PIAS3Q9Y6X2 628 aa15.94■□□□□ 0.14
SMC1A-204ENST00000463684 ZFHX4Q86UP3 3567 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 I3L4J1 428 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms