RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 PDCP20941 246 aa25.52■■□□□ 1.68
SSNA1-203ENST00000463511 IGFBP6P24592 240 aaPredicted RBP25.52■■□□□ 1.68
SSNA1-203ENST00000463511 U2AF2P26368 475 aaKnown RBP eCLIP25.52■■□□□ 1.68
SSNA1-203ENST00000463511 OR1D2P34982 312 aa25.52■■□□□ 1.68
SSNA1-203ENST00000463511 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.52■■□□□ 1.68
SSNA1-203ENST00000463511 ITFG1Q8TB96 612 aa25.52■■□□□ 1.68
SSNA1-203ENST00000463511 HCFC1R1Q9NWW0 138 aa25.52■■□□□ 1.68
SSNA1-203ENST00000463511 MYH11P35749 1972 aa25.52■■□□□ 1.68
SSNA1-203ENST00000463511 LRRN2O75325 713 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 GLULP15104 373 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 SYT1P21579 422 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 PPP2R5AQ15172 486 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 ZNF174Q15697 407 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 DCAF4L1Q3SXM0 396 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 MTSS1LQ765P7 747 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 C1orf210Q8IVY1 113 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 SEMA4AQ9H3S1 761 aa25.51■■□□□ 1.67
SSNA1-203ENST00000463511 SP9P0CG40 484 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 FGFR3P22607 806 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 CLCNKBP51801 687 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 STARD6P59095 220 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 SNW1Q13573 536 aaKnown RBP25.5■■□□□ 1.67
SSNA1-203ENST00000463511 RAB33AQ14088 237 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 OTOGLQ3ZCN5 2332 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 ATF7IP2Q5U623 682 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 SHDQ96IW2 340 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 PPP1R10Q96QC0 940 aaKnown RBP25.5■■□□□ 1.67
SSNA1-203ENST00000463511 MTRRQ9UBK8 725 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 CDY1Q9Y6F8 540 aa25.5■■□□□ 1.67
SSNA1-203ENST00000463511 TMEM189-UBE2V1I3L0A0 370 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 B3GAT3O94766 335 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 NT5DC1Q5TFE4 455 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 ZC3H14Q6PJT7 736 aaKnown RBP25.49■■□□□ 1.67
SSNA1-203ENST00000463511 RSPO2Q6UXX9 243 aaPredicted RBP25.49■■□□□ 1.67
SSNA1-203ENST00000463511 ERMP1Q7Z2K6 904 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 ING5Q8WYH8 240 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 IFT74Q96LB3 600 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 KXD1Q9BQD3 176 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 GOLGA2P5Q9HBQ8 144 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 CACNA1AO00555 2505 aa25.49■■□□□ 1.67
SSNA1-203ENST00000463511 I3L4J1 428 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 POU2F2P09086 479 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 TKTP29401 623 aaKnown RBP25.48■■□□□ 1.67
SSNA1-203ENST00000463511 CCT6AP40227 531 aaKnown RBP25.48■■□□□ 1.67
SSNA1-203ENST00000463511 EFNA5P52803 228 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 GNL2Q13823 731 aaKnown RBP25.48■■□□□ 1.67
SSNA1-203ENST00000463511 ECM1Q16610 540 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 UVSSAQ2YD98 709 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 PABPC1LQ4VXU2 614 aaKnown RBP25.48■■□□□ 1.67
SSNA1-203ENST00000463511 HAUS3Q68CZ6 603 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 MCTP1Q6DN14 999 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 NPAS3Q8IXF0 933 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 C3orf58Q8NDZ4 430 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 BHMT2Q9H2M3 363 aa25.48■■□□□ 1.67
SSNA1-203ENST00000463511 DNMT3BQ9UBC3 853 aaKnown RBP25.48■■□□□ 1.67
SSNA1-203ENST00000463511 DNAH14Q0VDD8 3507 aa25.47■■□□□ 1.67
SSNA1-203ENST00000463511 ORC2Q13416 577 aaPredicted RBP25.47■■□□□ 1.67
SSNA1-203ENST00000463511 MLF2Q15773 248 aaPredicted RBP25.47■■□□□ 1.67
SSNA1-203ENST00000463511 UPP1Q16831 310 aa25.47■■□□□ 1.67
SSNA1-203ENST00000463511 CD300LGQ6UXG3 332 aa25.47■■□□□ 1.67
SSNA1-203ENST00000463511 DDX27Q96GQ7 796 aaKnown RBP25.47■■□□□ 1.67
SSNA1-203ENST00000463511 KANSL1LA0AUZ9 987 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 VPS37CA5D8V6 355 aaPredicted RBP25.46■■□□□ 1.67
SSNA1-203ENST00000463511 MUTP22033 750 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 BRCC3P46736 316 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 TTC38Q5R3I4 469 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 CEP120Q8N960 986 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 KIFAP3Q92845 792 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 UROC1Q96N76 676 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 HINFPQ9BQA5 517 aa25.46■■□□□ 1.67
SSNA1-203ENST00000463511 DDX23Q9BUQ8 820 aaKnown RBP25.46■■□□□ 1.67
SSNA1-203ENST00000463511 SOX4Q06945 474 aaPredicted RBP25.45■■□□□ 1.66
SSNA1-203ENST00000463511 UBXN2BQ14CS0 331 aa25.45■■□□□ 1.66
SSNA1-203ENST00000463511 SLC44A4Q53GD3 710 aa25.45■■□□□ 1.66
SSNA1-203ENST00000463511 APBB1IPQ7Z5R6 666 aaPredicted RBP25.45■■□□□ 1.66
SSNA1-203ENST00000463511 KIAA2013Q8IYS2 634 aa25.45■■□□□ 1.66
SSNA1-203ENST00000463511 MAML2Q8IZL2 1156 aaPredicted RBP25.45■■□□□ 1.66
SSNA1-203ENST00000463511 KCNH3Q9ULD8 1083 aa25.45■■□□□ 1.66
SSNA1-203ENST00000463511 MTMR6Q9Y217 621 aa25.45■■□□□ 1.66
SSNA1-203ENST00000463511 BACE2Q9Y5Z0 518 aa25.45■■□□□ 1.66
SSNA1-203ENST00000463511 TICRRQ7Z2Z1 1910 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 K7ERI5 159 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 TRAPPC3O43617 180 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 STX6O43752 255 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 PRKCQQ04759 706 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 NBR1Q14596 966 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 ANKS3Q6ZW76 656 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 KIAA1024Q9UPX6 916 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 TNFSF13BQ9Y275 285 aa25.44■■□□□ 1.66
SSNA1-203ENST00000463511 MRPS23Q9Y3D9 190 aaKnown RBP25.44■■□□□ 1.66
SSNA1-203ENST00000463511 MTF2Q9Y483 593 aaPredicted RBP25.44■■□□□ 1.66
SSNA1-203ENST00000463511 PHLPP2Q6ZVD8 1323 aa25.43■■□□□ 1.66
SSNA1-203ENST00000463511 SMIM28A0A1B0GU29 152 aa25.43■■□□□ 1.66
SSNA1-203ENST00000463511 CCDC169A6NNP5 214 aa25.43■■□□□ 1.66
SSNA1-203ENST00000463511 CD72P21854 359 aa25.43■■□□□ 1.66
SSNA1-203ENST00000463511 TOB1P50616 345 aaPredicted RBP25.43■■□□□ 1.66
SSNA1-203ENST00000463511 FXR2P51116 673 aaKnown RBP eCLIP25.43■■□□□ 1.66
SSNA1-203ENST00000463511 OSTNP61366 133 aa25.43■■□□□ 1.66
SSNA1-203ENST00000463511 PFKPQ01813 784 aa25.43■■□□□ 1.66
SSNA1-203ENST00000463511 SLC5A9Q2M3M2 681 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms